Setaria viridis (green foxtail): 117837770
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Entry
117837770 CDS
T07951
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117837770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117837770
03036 Chromosome and associated proteins [BR:
svs03036
]
117837770
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117837770
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117837770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
117837770
NCBI-ProteinID:
XP_034573421
LinkDB
All DBs
Position
9:complement(50036153..50044206)
Genome browser
AA seq
1293 aa
AA seq
DB search
MFSPAIRKPHLLHRRDREEASPSPPPAAPTHSPSPRGFAIPDRPATGTPAPWTSSSLLAR
ISASKRTEKAGDSDQIQPVHVAEFPQVVRNAQAGLLQKNFSGKNMFAGGIDKETSLAWMI
CGNELFIWNYSASVAKDCLVLDVPSSLIGYKDVKPLPGIQWTVCIMRWHSSGASTRNSGE
ILYRKSSTGVILCNKRTQAVAYWPDIYAEFNRSLVLSSPFDELSASDGASDRFRFNSIIA
AAVPGGTHECIAIASEPTGALWLFKCSPEGIRQEKVLRDTLGDGGADHSQKSNGGRSLAW
LPSNVSSEGSDRKFFLLTNNEVQCWSVSLLHDINIKKLGSQEIVGTDGDASIKKDIAGQK
NIWLLDMQIDEHGKEFSILVATFCKDRVSGSNYTQYSLLTMLYKPNQKFSSEDNVVKVER
FLEKKAPSQVIIPKARVEDEEFLFSMRLRTGGKPSGSVIILSGDGTATVAIYWRGSTRLY
QFDLPWDSGKVLDASVIPSPEDGDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRK
GSCNEAVAEEKRRTQVFSASVAPRRVSSEAWSAGERQRPPLTGIAQQAVVDEESEMLLSR
LFHDFIISGAVNEALQKLRDAGAFDKEGEMNIFVRMSKSIVNTLAKHWTTTREAEFLAST
IVSSLVEKQQKHEKFLQFLVLSKCHEELASKQRAAMLTIMEHGEKLSGMIQLRELHNALI
QQRSSTHLSPQLKTQATGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIEDLFYC
LSHQLQYIISREEHPSVQMQRALELANACSTLVHAALHYRKEHKEWYPSPEGLITWNSHL
VVRSGIWSLASFVMELLGEFGAADMTMKSNLWSQLEGLTDILLEAYIGLLTAKFERGDEH
GVLVQEYCERRDELLGSLYNLAKQIVEAKYQQESRDGKDNLDLKESIFREVISPILATAK
RHEGYQTLWQICSDLNDSVLLRSLMHDSVGPHGGFSFFVFKELVNSRQYSKLLRLGEEFQ
EELASFLKDRNDLLWLHEICLNQFSSASETLHTYALRGSPDEDASVTTSRKPLSFAERRR
LLYLSKIAATAGKDIDYEAKVARIEADMWILKLQEEIVQHDPEYAQVKYTTTLLDPSELI
EMCLKRDQELSLKAFEVFASTSSSFRSSNRGLLEACWTNATNQDDWLKLSQASTSEGWSD
EVIQESLQGTVLFKASRLCYSPDSVVYDGTFEDVLPVKKEDVHLRGLESKCLSVEEVLMQ
HKDFPDAGKLMMTAVIMGKEVSYTAAEPVEMES
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccacacctcctccaccgcagggacagggaggaggcg
tccccttcacctccacctgctgctcctacccactccccgtcgcctcgcggattcgccatc
cccgaccgccccgctaccggaaccccggccccttggacctcctcctctctcctcgctaga
atttcggcatcgaaacgaactgaaaaggcgggtgattcggaccagatccaaccggtgcac
gtagcagagtttccccaagtcgttcggaatgcccaagccggccttctacagaagaatttc
tctggcaagaacatgtttgctggtggcattgataaagaaacatcccttgcgtggatgata
tgtggaaatgagctttttatctggaactactcggcttctgttgctaaagactgtcttgtc
cttgacgttccatcttctctgattggatacaaagacgtgaaacccctccccggtattcag
tggacagtttgtataatgagatggcatagtagcggtgcatcaacaagaaacagtggagag
atattgtatagaaaaagttctactggtgttatcctctgcaacaaaagaacacaagctgtt
gcttattggcctgacatctatgctgaatttaataggagtcttgtccttagttcaccgttt
gatgagctgtctgcaagtgatggtgcatctgatcgtttcaggtttaattcgattattgca
gctgcagttccaggaggcactcacgagtgtattgcaatagcttctgagcctacaggtgct
ttgtggttgttcaagtgttcaccagaaggaattcgtcaagaaaaagtcctcagagataca
ttaggagatggtggtgcggatcattctcagaaaagtaatggtggaaggtcattggcttgg
ctgccaagtaatgtatcatcggagggttctgatcggaagttctttttgttgacaaacaat
gaggtgcaatgttggagtgtctcactcttgcatgacatcaatataaaaaaattagggtct
caggaaattgttggtactgatggcgatgcgagcataaagaaagatatagctgggcaaaaa
aatatatggcttttggacatgcagatagatgagcatgggaaggaatttagcattcttgtt
gctacattttgcaaagatagggttagtgggtcgaactacactcagtattctcttctgacg
atgctgtacaaacctaaccagaagttttcatctgaagataatgtagttaaagttgaaagg
tttttggagaaaaaagctccctctcaggtgattattcctaaggctagagtagaggatgaa
gaattcttgttctcgatgaggctaagaactggtggtaagccttctggttctgtaatcatc
ctgtcaggtgatggaacagcaacagtggccatatattggagaggttcgacccgactttat
cagtttgatttgccttgggattctggaaaggtcctggatgcttccgttatcccatcacct
gaggatggagatgaaggtgcttgggttgtcctgacagaaaaggcaggagtctgggcgatt
cctgaaaaagctgtattagttggtggagttgaaccaccagagcgcagcttgtcacgaaaa
ggtagttgtaatgaagcagttgctgaggagaaaagaagaactcaagtcttcagtgccagt
gttgctcccaggagagttagctctgaggcttggagtgctggagagaggcaaaggcctcct
ttaactggaatagctcagcaggctgtggttgatgaagagtcagaaatgctactgagtcgg
ttatttcatgattttataatctctggtgcagttaatgaggcacttcaaaagcttagagat
gcaggagcgtttgacaaagagggtgagatgaatatatttgttaggatgagcaaatcaatt
gtaaacacattagctaaacactggacaacaaccagagaagctgaatttcttgcctcaaca
attgtttcatcccttgttgagaagcagcaaaaacatgagaaattcctccagtttcttgtc
ttgtcaaagtgccatgaagaactcgcttcaaagcaaagagctgcaatgctaactatcatg
gagcatggtgaaaagctttctggaatgattcagcttagggaattacataacgctctcatc
cagcagcgctcaagtactcatttatcacctcagttaaaaacccaagccactggtgccctt
tggaaccttattcagttggttggtgagaaagctcgaagaaacacagttctcttaatggat
cgcgataatgcagaagtgttctatagtagagtttctgatatagaggatctattttattgc
ttatctcatcagcttcaatacatcattagtagagaagaacacccttctgttcagatgcaa
cgtgcacttgagttagcaaatgcttgcagcaccttagttcatgctgcattgcactacagg
aaggagcacaaggagtggtatccttctcctgaaggactgataacatggaacagccacctt
gttgtacggtctggaatatggagtttagcatcatttgttatggagcttttgggagaattt
ggagctgcagacatgacaatgaagtctaatctatggtctcagctggagggactcacagat
attctactggaggcatatataggtcttttaactgccaaatttgaacgtggtgatgaacat
ggtgtgctagtccaagaatattgtgaaaggagagatgaacttctcgggtcactctacaac
cttgctaaacaaatagtggaggcaaaataccagcaggagtcaagagatggtaaagacaat
ttggatctgaaagaatctatatttagagaggttatttctccaattttggcaactgccaaa
cggcatgaaggataccaaacactgtggcagatttgctctgacctcaatgattcagttctc
ctccgtagtctaatgcatgatagtgtagggccgcatgggggattcagtttctttgtattt
aaagagctagtcaacagcagacaatactctaagctgttaaggctgggtgaagaattccag
gaagagctagctagttttctgaaagaccggaatgatcttctgtggcttcatgagatatgc
ttaaaccagttctcatctgcttctgagactcttcatacctatgctctgcgtggcagtcct
gatgaagatgctagtgtcacaaccagcagaaagccactgtcctttgctgaaagaagacgt
cttctttatctctctaaaattgctgcaacagcaggtaaggatattgactatgaagcgaag
gttgcacggatagaagcagacatgtggattctaaaattgcaggaagaaattgttcagcat
gatccagaatatgcacaagtcaaatatacaaccacattgcttgatccatcagaactgatt
gagatgtgcctgaagagagaccaagagctctcccttaaagcctttgaagtatttgcttcg
acaagctcatcgttccgaagctccaacagaggccttcttgaggcatgctggacgaatgca
accaaccaggatgattggctgaagctttcgcaggcatccacttcagaaggttggagcgac
gaagtcatccaagaatctcttcaaggaactgtccttttcaaagcttccaggttgtgttat
agccctgattcggtggtgtatgatggcacttttgaggatgtgctgcctgtgaagaaagag
gatgtacatctgagaggtttggagagcaaatgcttgtcagtggaggaagtgctgatgcag
cacaaggattttccagatgctggtaaattgatgatgactgcagtgattatgggcaaggag
gtatcttacacagctgcagaacctgtggagatggagtcatga
DBGET
integrated database retrieval system
