Setaria viridis (green foxtail): 117837800
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Entry
117837800 CDS
T07951
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117837800
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117837800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_HPS5
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
117837800
NCBI-ProteinID:
XP_034573461
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Position
9:11475577..11480791
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AA seq
1333 aa
AA seq
DB search
MRNLRLVTRLPQQLPLQLDGETLLASAVDAERRRAFFASSANFIYTVQLPASSTQGQEPL
PWSKIATQHSDVEEVVLEPGDCIVAMDYLMERESLLLGSSAGCLLLYNVEEKTTQVVGRL
EGGVNTIASSPDGALLSVTTGLGQLLVITQDWEVLFETSLDPQDATLGDIDSTGCQIRSS
ISWRGDGKYFATLGAPDGAYGPTKLTIWERESGKVHSSSDAKTFMGTSLDWMPSGAKVAT
IHDRRTEGKCPLIVFYEKNGLERSHFSIDEPAEVAIHALKWNCNSEILAALVSSGQHDVI
KIWSCRNNHWYLKHELRYTKEERVKFFWDPTKPMHLICWTLGGQVVIHRFAWTTAVSETS
VALVIDGSHILVTPLHLGLMPPPMSLFQLAFPCAVNEVSFVSSNSKTQLAAYLSNGNLCA
VELPAPDTWEEFEGSRISVDPCSSDFTLDNCMHLAWIDTHTLLGICCYSEHYCSTPIGSI
EASNLVDKHDSLFSINEIGLVCSEDFVPGSVSSSGWQARVSKKVPLQSSVIGISPNPAKK
GSAFIQISGGRIVEYCSSLNLSKMCVPAQISEVDSDHGFPASCPWMTAVLCHENGIAQPF
LFGLDDNSKLYMGKRLLSDNCSSFTFYSSAYGTTERVMSHLLVTTKQDLLYIVDVNKIFL
KDNKVTIDSHASSHPRGKQSKEHITVWEKGAKLVGVLHGDEAAVIMQTIRGNLECTYPRK
LVLVSIVQALAQRRFKDAMDMVRRHRIDFNIIVDYCGCDVFIKLAADFVKQVNNLSHITE
FVCSMKNDNVSSKLYEAYISFPDQCAVPMVDIECTPGFLGNKVTSVLMAVRKALEEQIEE
SSSRELCVLTTLARSEPPLLEEALNRIKVIRELELRGLDDAKRKLYPSAEESLKHLLWLT
DTEAVFGAALGLYDLNLAAIVALNSQKDPKEFLPFLKSLECLPPAIMRYTIDLRLGRYES
ALRNVVSAGNEYHEDCMKLLNSNPQLFPLALQLFNEPDKRNEILEAWGDHLSEEKCFGDA
ALTYQCCSSYQKSLKAYRACGDWKGVFTVAGLLELEKEEITQLAHELCDEFQALGKPGDA
ARVALEYCSDAERGVNYYIMAREWEEALRVAYMLTRHDLVGTVRDAASECAVSLISEYQE
GLLKVGKYVARYLAVRQRRLSLAAKLQSEDRFMDVEDDSISEVSTSFSEMSAYTTRSTKE
STASVISSNASKSRGARRQKKGGKIRAGSPGEEMALVEHLKGMALTGSAENELKSLLVVL
IQLGKEESARQVQQAADNFVVSQRAAVKLAEDTVCNDKVDENAHTLEHYVRMLRAHGSGH
SETGSWRIKALSP
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgcgcctcgtgacgaggctcccgcagcagctcccgctccagctcgacggc
gagaccctcctcgcctcggcggtcgacgccgagcgccgccgcgccttctttgcctcctcc
gccaacttcatctacaccgtccaactccccgcctcctccacacagggacaggaaccactg
ccatggagtaaaattgctactcaacactccgacgtggaggaggttgttcttgagcctgga
gattgcattgttgccatggattatctcatggagagggagtctctactccttggttcatcg
gctggttgcctgcttttgtacaatgtggaggaaaaaacaacccaagttgttggaagattg
gaaggtggtgtcaacaccattgcctctagccccgatggggccctcctttctgtaaccact
ggacttgggcaactgcttgtcatcacacaggattgggaagtgctgtttgagacttctctt
gatcctcaggatgctaccttaggcgacatagacagtactggttgtcagatccgaagctca
atttcttggcggggggatgggaagtattttgctacacttggggcccctgatggcgcttat
ggccccacaaagcttactatatgggaacgtgaatcaggaaaggttcattcatcttcagat
gccaaaacttttatgggaacatctttagattggatgcctagtggagccaaggttgccaca
atccatgaccggaggacagagggaaaatgccctctcattgtattctatgagaagaatggc
ttagagaggagccacttttctattgatgagccagcagaggttgccattcacgctttaaag
tggaactgcaattccgagatcctagctgctctagtttcttctggacagcatgatgttatt
aaaatatggtcctgcaggaacaatcactggtacttgaaacatgaactgcggtacaccaag
gaagagagggtgaagttcttttgggatccaacgaaaccaatgcatctgatttgctggaca
ctgggtggccaggttgttattcacaggtttgcttggactaccgcagtcagcgagacttca
gttgcacttgttattgatggttcccatattcttgttactcctcttcatttgggcctcatg
ccacctcccatgtctctcttccagcttgcatttccttgtgcagtgaatgaggtttctttt
gtgtccagtaactcaaagacccaattggctgcttatctctcaaatggcaatttgtgtgct
gtggagcttccagcaccagatacttgggaagaatttgaaggcagcaggataagtgttgac
ccttgctcttctgacttcactttggacaactgtatgcacctagcttggatagatacacac
accttgcttggtatctgttgctatagtgaacactactgttcaacacctattgggtccatt
gaagctagtaacctggtagacaaacatgattcactattttccatcaatgagattggactt
gtatgttcagaggattttgtgccaggttcagtgagttcatctggttggcaagctagagta
tcaaagaaagtgccattgcagagttcagtcattggaatctctccaaatccagcaaaaaaa
ggttcagccttcattcaaattagcggaggaaggattgttgagtactgttcaagtttaaat
ctgtcgaaaatgtgcgtaccagcacaaatcagtgaggttgattcggaccatggttttcca
gcatcatgtccttggatgactgcagttctgtgccatgaaaatggtatagctcaacccttt
ctctttggactcgatgataacagcaagctttatatgggcaaaaggttactgagtgacaac
tgcagcagcttcacattctactctagtgcttatggaaccactgagcgggtcatgagccac
ttgcttgtgactactaagcaagatcttttgtacattgtggatgtcaataagatctttctt
aaagacaacaaggtgacaattgacagccatgccagtagtcatcctcgaggaaagcaaagc
aaagaacacatcactgtgtgggaaaagggggcaaagttggttggtgttctccatggtgat
gaagcagcggtcataatgcaaacaatacgtggtaacttagagtgtacctaccctagaaag
ttggttctcgtttcaattgttcaggcactggctcagaggcgtttcaaagatgcaatggat
atggtgaggcggcatcggatagatttcaatatcattgttgactattgtggttgtgatgtt
tttataaagttagcagcagactttgtcaaacaagttaataaccttagccacataactgaa
tttgtttgctcaatgaagaacgacaatgtcagcagcaaattgtatgaagcctatatatct
tttcctgatcagtgtgcggtcccaatggttgatattgagtgcacacctggtttcttaggc
aacaaagtcacttctgtcctgatggcagttcgaaaagcccttgaagaacaaatagaggag
agctcatcaagagaactttgtgtattgaccactttagcccgtagtgaacctccattattg
gaggaagcactgaacagaataaaagtaattcgagaactggaacttcgtggccttgatgat
gccaagagaaagctttacccttctgctgaagagtctctgaagcacttgctttggttaacg
gacactgaagctgtttttggtgctgctttggggctgtatgatctgaatcttgctgcaatt
gttgctttaaattctcaaaaagatccaaaagagttccttccttttctcaagagtcttgaa
tgccttcctcctgctatcatgagatacacgattgatttaaggcttggaagatatgagagt
gctctcagaaatgttgtttctgctggtaacgagtatcacgaggattgcatgaaactcctt
aattctaatcctcagctgttcccactggccctccagttatttaatgaaccggataaaagg
aatgaaattcttgaggcatggggcgaccatctttctgaagagaaatgctttggagatgct
gcattgacttaccagtgctgttcatcatatcagaaatcactgaaagcttaccgtgcttgt
ggggactggaaaggtgtgtttaccgttgcaggtcttttggagttagaaaaggaagaaatt
actcagcttgcgcacgagttatgtgatgagttccaagctcttggcaagccaggagatgct
gctagagtagcactagagtattgttcagatgccgagagaggtgtaaattattatatcatg
gcaagggaatgggaggaggctcttagagttgcatacatgcttaccaggcatgatctggtt
ggaactgttagagatgcagcttcagaatgtgctgtatcactgatatccgagtaccaggaa
ggactgttgaaggttggtaaatatgtagcacgttatttggctgtgcgtcagaggagattg
tcccttgctgccaaactccagtcagaagaccggtttatggatgttgaagatgacagcatt
tcagaagtgagcaccagcttcagtgaaatgagcgcatataccacaaggtcaaccaaggag
tcgactgcttcagtgatatccagcaatgccagtaagtcacgaggggcaaggcggcaaaaa
aaaggtggcaagatacgagctggaagtcccggggaggagatggcccttgtggagcatctc
aaggggatggcgctgacaggaagtgctgaaaatgagctgaagagcctgctcgtggttcta
atacaactggggaaagaggaaagtgcccgtcaggtgcagcaggccgcagataattttgta
gtgtctcaaagggctgcagtgaagttggccgaggatacagtatgtaacgacaaggtagac
gagaacgctcacacccttgagcattacgtaaggatgctgagagctcatgggtcaggtcat
agcgagaccggttcatggcgaatcaaagcattgtctccttga
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