Setaria viridis (green foxtail): 117837809
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Entry
117837809 CDS
T07951
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117837809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117837809
03016 Transfer RNA biogenesis [BR:
svs03016
]
117837809
03012 Translation factors [BR:
svs03012
]
117837809
04131 Membrane trafficking [BR:
svs04131
]
117837809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117837809
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117837809
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117837809
Translation factors [BR:
svs03012
]
Eukaryotic type
Elongation factors
117837809
Membrane trafficking [BR:
svs04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117837809
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117837809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
117837809
NCBI-ProteinID:
XP_034573475
LinkDB
All DBs
Position
9:complement(46996925..46999994)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMLVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagtctcacattaacatcgtggtcattggccatgtcgactctggcaaa
tcgaccaccactggccacctgatctacaagcttggaggtattgacaagcgtgtgatcgag
aggttcgagaaggaggccgcagaaatgaacaagaggtccttcaagtatgcgtgggtgctt
gacaagctcaaggctgagcgtgagagaggtatcaccatcgacattgccctgtggaaattc
gagaccaccaagtactactgcacggtcattgatgcccccggtcaccgtgacttcatcaag
aacatgattaccggtacctcccaggctgactgtgctgtcctcatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctgcttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccacaccc
aagtactcgaaggcccgctatgatgagattgtgaaggaagtctcttcgtacctcaagaag
gttggatacaaccctgacaagattcactttgttcccatctctggtttcgagggcgacaac
atgattgagaggtccaccaacctggactggtacaagggcccaacactgcttgaggctctt
gacttgatcaatgagccaaagaggccttcggacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaactgtgcctgttggtcgtgtagagactggtgtcatc
aagcctggtatgcttgtcacctttggtcccagcggcctgaccactgaggtgaagtctgtt
gagatgcaccatgaggcgctccaggaggcccttcccggtgacaatgttggcttcaacgtg
aagaacgttgctgtgaaggatctcaagcgtgggtacgtggcctccaactccaaggatgac
cctgccaaggaggctgccaacttcacctcccaggtcatcatcatgaaccaccctggccag
atcggcaatggctacgccccagtgctggactgccacacctcacacattgctgtcaagttt
gccgagcttgttaccaagattgacagacgatctggcaaggagctcgagaaggagcccaag
ttcctgaagaacggtgatgctggtatggtgaagatggttcccaccaagcccatggttgtg
gagacattctctgagtaccctcctcttggtcgctttgctgttcgtgacatgaggcagacg
gttgctgttggtgtcatcaagagcgtggagaagaaggaccccaccggtgccaaggttacc
aaggctgctgccaagaagaaatga
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