Setaria viridis (green foxtail): 117837840
Help
Entry
117837840 CDS
T07951
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117837840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117837840
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117837840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RAG1_imp_bd
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
117837840
NCBI-ProteinID:
XP_034573507
LinkDB
All DBs
Position
9:34063811..34071112
Genome browser
AA seq
1081 aa
AA seq
DB search
MAWQPTRPLSQPVSATQPHCAPRQVVRTRSPRQTADSEAPTRITEVEIPTKPSLLRFSTA
ARGAATASAARWLRSPHLRATPDAATRLLPRQETTAHGHGAPARVEPSAPLGLPSPRDPP
AHAAMAAAGGDPLTPPSGIYYSRHKKSAERNSLFTPGVATYSSGHALPKVPSLVFGSASK
EWENIRQRKVQLINFLSSLESPSQNSAIAGKMAGSKLKNHSMEPTEQKGKPDIIILDSDD
EDENNSGYNKLAPKTNNELTTSELASNVMKWVASNGMSQASETMHAEGDKNTQIVPYGQS
AALVNQFPLQNSWQPSIQFERVVLQKRPEEQRMQDLVAANIVERRAETQVFLSLPTEKKR
RRSDPSLHVREDATTVPRQRKRKSDTDPVGADLSSGLRETDISSEPDLPIEEEEKPKNES
DGLEEYWKDFALAVESTKLDAVDEAANEKEEDSGKMEDVDCIHDIRIHEDLGHVCRICGM
IVRRAESIIDYQWKKASRRKTDCYGGHSKDVDDKDYGIVKLSEDFIVSDIAIHPRHARQM
RPHQLEGFNFLVKNLIGDKPGGCILAHAPGSGKTFMLISFIQSFLARYPSARPLVVLPKG
ILGTWKKEIQQWQVQDIPLYDFYSVKAEKRVDQLEVIKSWEDKMSILFLGYKQFSTIISD
DGGSKAAAACRERLLKVPNLLIMDEGHTPRNRETDVLESLNRVETPRKVVLSGTLFQNHV
NEVFNILNLVRPKFLKMESSRPIVRRIMSQVVMSGRSSKGIADNAFTESVEETLLHDENF
KRKAHIIRGLRELTKDVLHYYKGDILDELPGLVDFSVFLKLTPMQKEITQKKMGAYDKFK
RSAVDSSLYVHPCLSEISEVNAEDRANTLTDKSIDIMIDSINVRDGVKARFFMNILSLAN
SAGEKLLAFSQYILPMKFLERLLIKVKGWHVGKEIFMISGDTSQEDRELRVDQFNNSADA
KVLFGSIRACGEGISLVGASRVVILDVHLNPSVTRQAIGRAFRPGQHKKVFVYRLVAADS
AEEKHHETAFKKEVIPKLWFEWSEHCTTEDFKLSQVDIDDSGDELLDTKAVRQDIKALYR
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcaacccactaggccactatctcagcccgtctctgccacccaaccccactgc
gcgccacgtcaggtggtccggacccggagcccgaggcagacggcagacagtgaggccccg
acccgaatcaccgaagtggagattcccacaaagccctccctcctccggttctccaccgcc
gcccgcggcgccgccaccgcgtccgcggctcgctggctccggagtccgcacctccgcgcc
acgccggacgccgccacccggctactccctcggcaagagacgacggcgcacggccacggc
gcacccgctcgcgtcgagccttcagcccccctcggcctcccctctccacgcgaccctccg
gctcacgccgcaatggccgccgccggcggcgacccgctgaccccgccctctggcatatat
tacagcaggcacaagaaatccgctgagcgcaacagcttatttacacctggagttgcaacc
tattccagtggtcatgcacttcctaaggtccccagtttggtatttggcagtgctagcaag
gaatgggaaaacattcgtcagcgcaaggtccaattgatcaacttcctttctagtctggaa
agtccctctcaaaattctgccatagctgggaaaatggcaggtagcaaattgaagaatcat
tctatggagccaacagaacaaaaaggaaagcctgacatcataattcttgattcagatgat
gaggacgaaaacaattcaggatacaataagttggcgcctaagacaaacaacgaactgaca
acatctgaattggctagtaatgtcatgaaatgggtggcatccaatgggatgagccaagca
tctgaaaccatgcatgctgaaggagacaaaaatacacagattgttccatatggtcaaagt
gcagctttagtgaatcaatttcctttgcaaaacagctggcaaccatctattcaatttgag
agagttgtgttgcagaaaaggcctgaggagcagcgtatgcaagatctcgtggctgctaac
atagtggagaggagagcagaaacacaagtgttcctttcacttcctactgagaaaaagcga
aggaggtcagaccccagcttgcatgtcagggaagatgctaccactgtccctagacaaaga
aaaagaaaatctgacacagatccagtaggtgctgatttatcatcgggtttacgagaaact
gacatttcatcagaacctgacctgcctatagaggaagaggagaaaccaaaaaatgaaagt
gatggtcttgaggaatattggaaagattttgcgttggctgttgaaagcacaaagcttgac
gcagttgatgaggcagcaaatgagaaagaagaggatagtggaaagatggaggacgtcgac
tgcattcatgacattcggattcatgaagatttgggccatgtatgccgtatctgtggtatg
attgtgagaagagctgaatcaataattgattatcagtggaaaaaggcttcaaggagaaaa
acagattgctatggaggacattcaaaggatgttgatgacaaagactatggtattgttaaa
ctgtccgaagattttatagtttcagatattgctattcatcctagacatgctaggcaaatg
agaccgcatcagttggaaggattcaactttttggttaagaatttgattggagacaagcct
ggaggttgcattcttgctcatgccccaggttcagggaaaacgtttatgcttataagtttc
attcagagcttcctagcaaggtatccatctgcaaggccccttgttgtgctgcccaaaggg
atattaggcacatggaagaaagaaattcaacagtggcaagtgcaggatataccattgtat
gatttctactctgttaaggctgaaaaaagagtagaccagttggaagtcatcaaatcatgg
gaagacaagatgagtatactgtttcttggatacaagcagttctccacaatcatctctgat
gatgggggcagcaaagcagcagctgcatgtagggagaggctgcttaaggtccccaacctt
ttgataatggatgagggtcatacacctagaaatcgggagactgatgtactagaatctctg
aatagagtggaaacaccacgcaaagtggtcctttcaggtacacttttccagaatcacgtt
aatgaagtgtttaacatcttgaatcttgttcgcccaaagtttctcaagatggaatcatcc
cgtcctattgttagacggataatgagtcaagtagtaatgtcaggtagaagttcaaaaggg
attgctgacaatgcatttactgagtcagttgaagaaaccttgttgcatgatgaaaacttc
aagagaaaagctcatatcattagaggtcttagagaacttacaaaggatgtgcttcactac
tataagggtgatatcttagatgaactacctggcttagtagacttcagcgtgttcttgaaa
ctcactcccatgcagaaagagatcactcaaaagaagatgggagcatatgacaagttcaaa
agaagtgcagtagatagttcattgtatgttcatccttgtctttcggaaatttcagaagtt
aatgctgaggatagggctaacacattgacagataagtcaattgatattatgattgattcc
atcaatgtgagagatggggtgaaggccaggtttttcatgaatatcctgtcacttgctaat
tctgcaggagagaaattacttgcttttagccaatatatacttccaatgaaatttttggaa
aggctgcttattaaggttaagggctggcatgtggggaaagagattttcatgatctctggt
gatactagtcaagaagacagagaattgagagtagatcaatttaacaactctgctgatgca
aaagtgctgttcggttccatcagggcatgtggcgagggcatctcccttgtcggcgcatcg
agagtcgtcattttagatgttcacctgaacccatctgtcacccgtcaagcgatcgggcgt
gcattcaggcccggacagcataagaaagtgtttgtatacaggcttgtagctgctgattct
gctgaggagaagcaccatgagactgcattcaagaaagaagtcataccgaagctttggttc
gaatggagtgaacactgtacaacagaagactttaagctcagtcaagttgacattgatgac
tctggggatgaattattggatactaaagcagtgcgccaggatatcaaggcactgtataga
aggtaa
DBGET
integrated database retrieval system
