Setaria viridis (green foxtail): 117837969
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Entry
117837969 CDS
T07951
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117837969
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117837969
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117837969
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117837969
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117837969
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117837969
Prokaryotic type
117837969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
117837969
NCBI-ProteinID:
XP_034573696
LinkDB
All DBs
Position
9:complement(14010697..14018579)
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AA seq
1043 aa
AA seq
DB search
MEKPLDEKELERKLKKDQKAKEKEEKKQKAKQKEAARLQAQAASDGGGGKKSDKKLRKKS
ATDENPEDFIDPETPSGQKKLLASQMAKQYSPAAVEKSWYAWWESSQYFEADAASSKPPF
VIVQPPPNVTGVLHIGHAITAAIEDAIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLM
REKNLSRHDVGREKFLCEVLKWKEQHGGAILKQLRILGASLDWSRECFTMDEQRSKAVTE
AFVRLYKDGLIYRAHRLVNWDCTLRTAISDIEVDHEDLAGETPLEVPGYRSPVQFGVLIS
FAYPLEEGLGEIIVATTRIETMLGDTAIAVHPQDERYKHLHGKYALHPFNGRKLKIICDA
ELVDPSFGTGAVKITPAHDPNDFKVGEQHNLEFINIFTDDGKINEMGGSQFEGMPRFAAR
TAVIDALKNKGLYRDTKSNVMSLSLCSRSKDVVEPMMKPQWFVNCNSMAKEALDAVKSKK
IEIIPPQYEQDWYRWLENIRDWCISRQLWWGHRIPAWYVTLEDDKDKDMGSYSDHWIIAR
DENDAILEAKQRYPGKKYQLYQDPDVLDTWFSSGLFPLSVLGWPDDKPDLSTFYPSSVLE
TGSDILFFWVARMVMMGMQLGGDVPFQKVYLHPIIRDAHGRKMAKSLGNVIDPIDVINGI
SLENLQKKLEDGNLDPKEVEKAKEGQRKDFPNGIPECGTDALRFALISYTSQSDKINLDI
KRVHGYRQWCNKLWNAIRFAMTKLGDQYAPPATIAVCSLPPVCKWILSVLNKAVGKIELS
LEAYKFSEATSSIYSWWQYQLCDVYIEAIKPYFNESQEFESARGASRDTLWVCMDTGLRL
LHPFMPYITEELWQRLPQPKEACTKDSIMISEYPAVVHEWTNDQIENEMEIVLDTVNKLR
SLRPSTDTYERRPAFVLCRGLETAATMRSYQSYITTLASVSSLQILAEDDPTPLDCATHI
VNKDLSVFLQLRGALDTKAEREKLRRKREEIQRQHDALSQKMNASGYREKAPQSKQDEDA
RKLAALLGELEIVDEAESKLDAN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccgctggatgagaaggagttggagaggaaactgaagaaggatcagaaggcg
aaagagaaggaggagaagaaacaaaaagcaaagcagaaggaagcggctaggctccaggca
caagcagcatctgatggaggtggaggtaagaagagtgataagaagctgagaaagaaaagt
gccacggatgagaatcctgaggatttcattgacccagagactccttctggacagaaaaaa
ctgctggcatctcaaatggcaaaacaatatagccctgctgctgttgagaaatcctggtat
gcttggtgggaatcatctcagtattttgaagcagatgcagcaagctcaaagccaccattt
gttatagtccagccaccccctaatgtgactggggtgcttcacataggccatgcgatcaca
gcagctattgaggatgctataattcgctggcggaggatgtcgggctacaatgctttatgg
gttcctggaatggaccatgctggcatagctacacaggtggtggttgagaaaaaactcatg
cgtgagaagaatctttcaaggcatgatgtaggacgtgagaaatttttgtgtgaggtcctc
aaatggaaagagcagcatggtggtgccattctgaaacaacttcgcatacttggagcttca
cttgattggtcacgcgagtgttttacaatggatgagcagagatcaaaagctgtgactgag
gcttttgttaggctgtataaggatggtttaatttatagagctcatcgtcttgtgaactgg
gattgcacacttcgaacagcaatttctgatattgaggttgaccatgaggatcttgcaggg
gagactccattagaggttcctggttatagatctccagtgcaatttggtgttttgatatct
tttgcctatcctctagaagaaggtttaggtgaaattattgtcgcaacaaccaggatagaa
acgatgcttggcgatactgccatagctgttcatccgcaggatgaaagatataagcactta
catggaaaatatgctttacaccctttcaatggccgaaaactcaaaataatttgcgatgct
gagttagtggatcctagttttggtactggcgctgtcaagattacaccagctcacgatccc
aatgatttcaaggttggggaacagcataaccttgagttcattaatattttcacagatgat
ggaaaaataaatgaaatgggaggctcgcaattcgaagggatgccacgttttgctgctcga
actgctgttattgatgcattgaagaataagggtctctaccgagacacaaaaagtaacgtg
atgagcttgagtctgtgttcaagatctaaagatgttgtggagccaatgatgaagcctcaa
tggtttgttaattgtaactctatggcaaaggaagctcttgatgctgtgaagtccaaaaaa
attgagatcattccaccacaatatgagcaagactggtacagatggcttgaaaacatacgt
gattggtgtatatcaaggcaactctggtggggacaccggatacctgcttggtatgtgaca
ttagaagacgacaaagacaaagacatgggttcttacagtgaccactggattatcgcaagg
gatgaaaatgatgcaatcctggaggcaaagcagaggtatccagggaagaaatatcagtta
tatcaagatcctgatgtactggatacatggttttcatctggcctctttccattaagtgta
cttggttggccagacgataaacctgatcttagtacattctaccctagttctgttcttgaa
actggatcagatatcctcttcttttgggtagcacggatggtgatgatgggaatgcaactc
ggtggggatgtgccatttcaaaaggtttacttgcatccaattattcgtgatgcacatggc
cgtaaaatggccaagtcactgggaaatgtcattgaccccattgatgtaataaatggcata
tcactggaaaatcttcagaaaaagttggaagatggcaatctggatccaaaagaggtagag
aaagcaaaagaaggacagagaaaggatttccctaatggcattccagagtgtggtacagat
gcccttcgctttgccctgatttcttacacttctcagtctgacaagataaacctggatatc
aaaagagtgcatgggtatcgacagtggtgcaataagctgtggaatgccattcgttttgcc
atgaccaagcttggagatcagtacgccccaccagcaactattgcagtgtgttctttgcct
cctgtctgcaaatggatactctcagtacttaacaaggctgttggcaagattgagttatcg
ctagaagcgtataaattctctgaggctacgtcctctatatattcatggtggcagtaccag
ctttgcgatgtatatattgaagcaataaaaccttacttcaatgaatctcaagagtttgaa
tctgcaagaggtgcttctagagatacattatgggtatgcatggacacgggtttgcgcctg
ctccatccattcatgccttacataactgaggaactttggcagcgtcttcctcaacctaaa
gaagcctgtacaaaagattccattatgatatcagaataccccgcagtagtacatgaatgg
acaaatgatcaaattgaaaatgagatggagatcgtgttagatactgtgaacaagctacga
tcacttcggccatcaacagatacatacgaaagacgtcctgcttttgtgctttgccgaggc
ttggagactgctgccaccatgcgctcctaccagtcttatatcacaacacttgcgtctgta
tcatctcttcagatcctggccgaagatgacccaactcctcttgattgcgccacgcatatt
gtaaacaaggatctatccgtgttcctccagctccggggagctctggacactaaagctgag
cgtgagaagctaaggagaaagagggaggagatccagaggcaacacgatgcgttgtcacag
aaaatgaatgcttcgggataccgcgagaaggccccgcagagcaagcaagacgaggatgcg
aggaaactcgctgctttgttgggagagcttgagatcgtggacgaggctgagagtaagcta
gatgctaactga
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