Setaria viridis (green foxtail): 117838003
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Entry
117838003 CDS
T07951
Name
(RefSeq) flowering locus K homology domain
KO
K21444
poly(rC)-binding protein 3/4
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117838003
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117838003
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
117838003
NCBI-ProteinID:
XP_034573755
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Position
9:complement(20335014..20340906)
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AA seq
587 aa
AA seq
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MAKMQSSSKEQMVHKAACKSHEQSVLKQGAVDDEDSGDATSSAVENRYPGWPGTSVFRML
IPSHKVGAIIGHKGEKVRRLCEETKACVRIIGGHLCAAEQAVIIFGKELPDEPLPPAMDA
LLRVYQQIINDDALDVGSNSTFVTRILAPSEQAASLIGEQGAMISSIMQASQTNIRVLDG
DLPPVALEEDRVIEIWGLPSAVHKALELVASHLRKYLVDRSVIPLFDRHVPMPMLHTDMP
LCHYIDHPDGPVHADSPGYHSVCSEDFQREPWIDTSYLRVRHPIENLLHADTFEHRWEAP
TSFRRYRSVTPPNHGRSAYGPEASSPMEAYQSAPMELRSHCNLRYGWHATPISPTASFER
VRSLISVYGQQAHPRRQTYQSAEMGKHRRFVKTLHGSEAYPTRVSPSDASELPPNPGISA
RGREASPPFRMHPPTTVENLLHCRVSACGPEAPPHQAPPSSTSRSAAVASQVKKKMQVPI
FYAEAVIGPSGERIEYIRRTSRSSILINDSEEGIMSIEITGTAATDVLTAEQLIKNFMAE
AAAASPGHSFDFIPSYLPASRSPQVDSLTTEKSGVTSLPAPRLQMIY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgcagtcaagttccaaggagcaaatggtccataaagcggcttgcaaatcc
catgagcagagtgttctcaaacaaggcgctgttgatgatgaagactctggtgatgccact
tcctctgctgttgaaaacaggtatcctggttggcctggaaccagtgtcttcaggatgctg
attccttcacataaagtcggtgcgataattggccacaaaggtgagaaggttagaagactg
tgtgaggaaacaaaagcctgcgtccgaattataggtggccatctatgtgcggcagagcaa
gctgtaatcatttttggaaaggagctgcctgatgagccactacctccagctatggatgcg
ctactaagagtatatcagcaaataattaatgatgatgctttagatgtgggatccaatagt
acatttgtgacacggattcttgcaccaagtgaacaggcagcaagccttattggtgagcag
ggtgcgatgataagttcaatcatgcaagcttctcaaaccaatatccgtgtccttgatggt
gatctgccacctgttgcactggaagaagatcgggttattgaaatatggggattgccttca
gcagtgcataaggctttggaacttgttgcttctcatctgaggaagtatctggttgatcga
agtgttatcccattgttcgaccgtcatgtccctatgccaatgttgcacacggacatgcct
ctgtgccactacattgaccatcctgatggccctgtgcatgcagatagtccaggctatcac
tctgtatgttctgaagattttcagcgtgaaccatggattgacacttcctatttgagggtt
aggcatcctatcgaaaaccttctacatgctgatacatttgaacacagatgggaagcacct
acatctttcaggcgatatcgatcggttacaccaccaaaccatggtagaagtgcatatggg
ccagaagcatcttcacctatggaggcatatcaatcagctcctatggaattacgttcacac
tgcaacctcagatatggatggcatgcaactccaattagtccaacagcttcttttgaaaga
gtacgttcccttatatctgtgtatggacaacaagcacatccacggagacagacatatcaa
tcagctgaaatgggcaaacatcgacgcttcgtaaaaactttacatggaagtgaagcttat
ccaaccagggtatctccatcagatgctagtgaactacctcctaatcctggtatttctgca
cgtggacgagaagcatctccacccttcaggatgcatccaccaactactgtggaaaatctt
ctgcactgtcgcgtatctgcatgtgggccagaagcaccaccacatcaggctccgccttca
tcaaccagtcggtctgcagcagttgcttctcaggtcaagaagaagatgcaagttccaata
ttctatgctgaagctgtgattgggccatctggtgaaagaatcgaatacattcggcgtacc
agcagatcgagcattttgataaacgattctgaggagggtataatgtctattgagatcact
ggaactgctgcaacagatgttctaactgcagagcagctgattaagaactttatggctgaa
gcagctgccgcctcccctggtcatagtttcgacttcattccatcatatttgccagcatcc
agatctccccaagttgatagtcttactactgagaaaagcggagtgactagtttgccagct
ccgcgccttcaaatgatatactga
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