KEGG   Setaria viridis (green foxtail): 117838030
Entry
117838030         CDS       T07951                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03022  Basal transcription factors
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117838030
  09124 Replication and repair
   03420 Nucleotide excision repair
    117838030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117838030
   03400 DNA repair and recombination proteins [BR:svs03400]
    117838030
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117838030
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117838030
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Exo70_N RB_B
Other DBs
NCBI-GeneID: 117838030
NCBI-ProteinID: XP_072147036
LinkDB
Position
9:complement(6030165..6035224)
AA seq 337 aa
MSDFRTSTQRERWIFQPHDLMERWAAANQRAAETLAQYGTTRMKVDQLDGSVDSPDRGMA
TLVDCKPTLEGSSDVKPLSYEEEQLTRVFYEQKIQEVCVAFKFPHKIQATAIIYFKRFYL
QWSVMEHHPKHIMLTCVYASCKVEENHVSAEELGKGIQQDHQIILNNEMVLLKTLDFDLI
VYAPYRSIEGFIDDLEGFCRVGNGAVQRLKELHQTAMSHADKMMLTDAPLLYTPGQLALA
ALHKSNDILRVFDFERYLETIFSRQHSDCTVEQFVQSINAIHYLVDQLKIPTVKDMRYVD
RKLKHCWDRSSHDEHKKKEKKSKHKSKRTSTDAQLNG
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtcggatttccggacctccacgcaacgagagaggtggatcttccagccgcacgatctg
atggagaggtgggcggcggctaaccagcgggccgcggagaccctcgcgcagtatgggacg
acgcggatgaaggtggaccagttggatgggtcggtcgattcgccggatcgtggtatggcg
actctggttgattgcaaacctactcttgagggtagctcagatgtaaagcctctgtcttac
gaagaggagcaattgacacgagtattttacgagcagaagattcaagaagtatgtgtagca
ttcaaattccctcacaaaatccaggctacagctataatatatttcaagagattctatcta
cagtggtctgttatggagcatcacccaaagcatattatgttaacatgtgtatacgcttct
tgcaaagtggaagaaaaccatgtttctgctgaggagcttggtaaaggaattcagcaggac
caccagatcattctaaataatgagatggtccttcttaagactttagattttgatctcatt
gtttatgcgccatatcgatctattgaaggatttattgatgacctggagggtttctgcagg
gtaggtaatggtgcagtacagcgtttgaaggagttgcatcaaaccgcgatgtcccatgct
gacaaaatgatgttgaccgatgctcctcttctctatactccagggcagttggcactggct
gctttgcacaagtccaatgatattctcagggtcttcgattttgaaagatacttggaaact
atcttctcaaggcaacattctgattgtacagtcgaacagtttgttcaatcaatcaatgca
atccattacttggttgaccagcttaaaatacctactgttaaggatatgaggtatgttgac
cgcaagctgaaacattgttgggatcgaagctcgcatgatgagcataagaagaaagagaag
aagtcaaaacacaaatcgaaaagaacatctactgatgcacagctcaacggctag

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