Setaria viridis (green foxtail): 117838090
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Entry
117838090 CDS
T07951
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117838090
03036 Chromosome and associated proteins [BR:
svs03036
]
117838090
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117838090
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117838090
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117838090
microRNA pathway
RISC loading complex
117838090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
ATG7_N
Motif
Other DBs
NCBI-GeneID:
117838090
NCBI-ProteinID:
XP_034573859
LinkDB
All DBs
Position
9:2993490..3002757
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AA seq
1058 aa
AA seq
DB search
MAYRGSGRGGRGAGDRGDQRPPYRGGGGGGGRGFVWPPPASTPRPVPSQYPVPMGYPAPM
VLPHQAAYGAPAAVYRAPAPAAPPVSFSPAPAAAPVTIRPPPSSASPAPPSAPAPRQLPQ
GAPTRAPEPAPASSAPSAAALAKEVEKKLFVSETALAPPAAAASAAVAAALGAAACDAED
ATDVDLAPVSKKGLAHPARPDLGTVGKKVMIRANHFLVDVADNNLFHYDVAINPESKSRQ
TNREVLNELIKLHGKTALGGKLPAYDGRKSLYTAGSLPFESEEFVVTLVDPEKKEKERAE
REYKITIRIAGRTDLYHLHQFLRGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTT
FGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIKFVEEFLSIRDTSR
PLSDRDRVKIKKALRGVRIETSHQQDQIRRYKITGITPIPMSQLIFPVDEKGTRQTVVQY
FWDKYNYRLKFGSWPCLQAGSDSRPVYLPMEVCKIVEGQRYSKKLNDRQVTNILRATCKR
PQEREQSIRDMVLHNNYAEDKFAQEFGIKVCSDLVSVPARVLPPPLLKYHDSGREKTCAP
SVGQWNMINKKMINGGTIDNWTCLNFSRMRPEEVQRFCMDLTHMCNATGMNVNPRPFVEV
KSAAPNHIENALRDVHRRATQMAAQQGARNQLQLLIVILPDVSGSYGKIKRVCETDIGIV
SQCCLPKHASRPNKQYLENVALKINVKVGGRNTVLERAFVRNGIPFVSEVPTIIFGADVT
HPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFTVSKDPQKGHNVNGG
MIRELLIAFRRKTNRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTF
VVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDQKICHPTEFDFYLCSHAGIQGTSRP
THYHVLYDENRFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESS
DGGSTPGSSGQAVAREGPVEVRQLPKIKDNVKDVMFYC
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccgcggcagcggccggggaggccgcggcgccggcgaccgcggggaccagcgc
ccgccgtaccgaggaggcgggggcggtggcggccgcggcttcgtgtggccgccaccggcg
tccacgccgcgcccggtgccgtcgcagtacccggtgccgatggggtaccccgcgcccatg
gtgctgccgcaccaggccgcgtacggggcgccggcggccgtgtaccgggcgccggcgcca
gcggcgcctccggtatccttctcgcctgcgcctgctgcggcgccggtcaccatccgcccg
cctccttcctcggcgtcgccggctccaccttcggctccggctccgcgacagctgccgcag
ggtgctcccacgcgagcgcccgagccggccccggcctcctccgcgccgtctgccgcggcg
ctggcgaaggaggtcgagaagaaactcttcgtgtcggagaccgcgctggcgccgccggct
gcggctgcgtcggcggccgtggcggccgcgctaggggcggctgcctgtgacgcggaggac
gctacggacgtggacctggcgccggtctccaagaagggtctcgcgcacccggctcggccg
gacctcggcaccgtcggcaagaaggtgatgatccgcgccaaccacttcctggtcgacgtc
gccgataacaacctcttccactacgatgttgccattaatcctgagtcaaagtcaagacaa
acgaatcgggaagttcttaatgaactcatcaagttgcatgggaagacagctttgggtggc
aaattgcctgcctatgatggaaggaagagtctgtatactgctggttcgcttccttttgaa
tcagaggagtttgtggttacactggttgatccagaaaagaaggagaaagaaagggcggag
agagaatacaagatcacaattcgaattgctgggagaacagacttgtaccaccttcaccag
tttctacgtggaagacagagggacatgcctcaagagaccatacaagtacttgatgttgtc
ctcagggagtcgccatcttggaattatgtcaccgtgtccagatcctttttctctactact
ttcggtcacagaggagacattggcgaggggcttgagtgctggaggggttactaccagagc
ctgcgtccaacacaaatggggctttcactgaatatagatatatctgcgacatcctttttt
aagcctgtgacagtgatcaagtttgtggaagagttcctgagcatacgtgatacctctcgt
cctttgtcagacagagatcgtgtgaagataaagaaggcattacgtggagttcgcattgaa
acaagtcaccaacaggaccagatcagaagatacaagataactggaatcactcccatccct
atgagccagctgatatttcctgttgatgagaagggaacaagacagactgttgtgcagtac
ttttgggacaaatataactacagattgaagtttggttcttggccctgtcttcaggctggc
agtgattcgcgtcccgtatatttgcctatggaggtttgcaagatcgtagaagggcagaga
tactctaagaagcttaatgacagacaagtgacgaacatacttagagcaacctgtaaacgt
ccccaggagagagagcagagcatccgtgatatggttctgcataacaactatgctgaggat
aagtttgctcaggaatttggcatcaaagtctgcagcgaccttgtgtctgttccagcccgt
gtgctgcctccacccttgttgaaatatcatgactctggtagggagaaaacttgtgcccca
agtgttggacaatggaacatgattaacaagaaaatgatcaacggtggaactattgataac
tggacttgtttgaacttttcacgcatgcgtcctgaggaggtacagaggttctgtatggat
ctgacccatatgtgcaatgccacaggaatgaatgtcaatccaaggccatttgttgaagtc
aagtcagctgctcctaaccatatcgagaatgctttgagagatgtacacagaagggccaca
caaatggctgcccaacagggagcacgaaatcagctacagcttctaattgtaattctgcct
gacgttagtggttcctatggaaaaattaaaagagtctgtgagactgacatcggaattgta
tcccagtgttgcctgccaaagcatgctagcaggccaaacaagcaatatctggaaaatgtt
gcactcaaaatcaatgtcaaggttggagggcgcaacacagttcttgagcgagcctttgta
cgcaatggcataccctttgtgtcagaagtcccaacaataatctttggcgctgatgtcaca
caccccccaccaggagaggactctgcatcatccattgctgctgtggtggcatcaatggac
tggccagaaatcaccaagtacagaggtcttgtttctgctcaaccacaccgacaagagata
atagaagacctgtttaccgtcagtaaagatccacagaaggggcacaatgttaatggtggc
atgatcagggagctactgattgctttccgcaggaagacaaaccgcaggcctgagaggata
atattctacagggatggtgtaagtgaaggtcaattcagccatgtactgcttcatgaaatg
gatgccataagaaaggcttgtgcttctttggaggagggatatttacctccagtcaccttc
gtagttgtccagaaaaggcatcacacaaggcttttccctgaggttcacggaaggcgtgat
atgactgacaaaagtggaaacattctccctggaactgtggttgaccaaaagatttgtcat
cctactgagttcgatttctacttgtgtagtcatgctggtattcagggaacaagtcggccc
acccattaccatgtcctttatgatgagaatcgttttactgctgatgcgctacagtcactg
accaacaatctttgctacacctatgctcgttgcacccgtgctgtgtcagtggtcccgcct
gcctactatgcccaccttgctgctttccgtgctcgctactatgtggaaggagaaagctcg
gacggtggctcaacccctggcagcagcggacaagcagtagctcgtgagggtcctgtggag
gtacgccaacttccgaagatcaaggacaacgtcaaggacgttatgttctactgctga
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