Setaria viridis (green foxtail): 117838092
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Entry
117838092 CDS
T07951
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117838092
04121 Ubiquitin system [BR:
svs04121
]
117838092
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117838092
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117838092
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117838092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Zn_ribbon_GTF2H2
Zn_ribbon_6
zf-Nse
zf-RING_16
DUF7129
Zf_IFT144_1st
HypA
DUF8054_C
Motif
Other DBs
NCBI-GeneID:
117838092
NCBI-ProteinID:
XP_034573862
LinkDB
All DBs
Position
9:43905131..43907258
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AA seq
285 aa
AA seq
DB search
MSGGRQSYWCYQCRQRIRPRGREMVCPYCDSGFVAEMDDVDALMNHFVGMDPDFQRDPRF
GIMEAISAVMRHGMTGMNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLTEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPAAQSSIDAMPTVKITQRH
LSGDSHCPVCKEKFELGSEAREMPCNHLYHSDCIVPWLEQHNSCPVCRYELPTQGSATGA
SCSRTRSTNQSQSSSSSSSSGRTSGRQRRRNPFSFLWPFRSSSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggcaggcaatcatactggtgttaccaatgccgacagcggataaggcctcgt
ggccgggagatggtgtgtccttactgtgattccgggtttgtggctgaaatggatgatgtt
gatgctctcatgaaccacttcgttgggatggatcctgatttccaacgtgacccaaggttt
gggataatggaggcaatctccgctgtgatgcggcatggtatgactgggatgaacagggag
gttgatgttagaggaaggccaaacatcttttcagacctagagatggagtttggctcaggg
ccatggctgctcttccgtggccagctccctggtcatctcacagaggataatggtttcgat
gtgttcatcaatggacggcgtggtgttggcatgaggagggcaaacattgcagactacttt
gttgggcctggattggatgatctcattgagcaattaactcagaatgatcgtcgtggacca
ccccctgccgcacagtcctcgattgatgctatgcccacagttaagatcactcagaggcat
ctaagtggagactcacactgccctgtctgtaaggagaagtttgagttgggatcagaagca
agagagatgccatgcaaccatttgtaccactctgattgcatagttccttggctagagcag
cataattcctgccctgtttgccgttacgagcttccaacacagggttctgctactggagct
agctgctcacgcacaagatcaacgaaccaaagccagagctcaagtagttcaagcagcagt
gggagaaccagtgggcggcaaaggagaaggaacccgttctcgttcctgtggcctttccgc
tcatcaagttctcgctag
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