Setaria viridis (green foxtail): 117838188
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Entry
117838188 CDS
T07951
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117838188
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117838188
Peptidases and inhibitors [BR:
svs01002
]
Serine peptidases
Family S54: Rhomboid family
117838188
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
117838188
NCBI-ProteinID:
XP_034574005
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All DBs
Position
9:complement(55577569..55580602)
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AA seq
324 aa
AA seq
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MATRGDVEKGAVRKEAGKVPSSLYPQHEGEREWVPWIVPVFFVANITVFVVTMYANNCPV
HTPAKDGKCIGRFLGRFAFEPLRQNPLLGPSSATLTKLGALVWQKVVHEHQGWRLLSSMW
LHAGVVHLVANMLSLLFIGMRLEQQFGYVRIGVVYLLSGLGGSVLSSLFIRNSISVGASG
ALFGLLGAMLSELLTNWTIYTNKVAAVLTLLFVVAVNLVLGILPHVNNFAHIGGFLTGFL
LGFVVLMRPHFAWMERYSMPAGSACTSKKYLLYQWILMAVALVLLVIGFAVGMAMLFRGA
NANDSCSWCRYLSCVPTSSWKCTN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgcggggacgtggagaagggcgccgtgcggaaggaggccggcaaggtgccg
tcgtcgctgtacccgcagcacgagggggagcgggagtgggtgccgtggatcgtccccgtc
ttcttcgtcgccaacatcaccgtcttcgtcgtcaccatgtacgccaacaactgccccgtc
cacaccccggccaaggacggcaagtgcatcggccgattcctcggccgcttcgccttcgag
ccgctgcgacagaacccgctcctcggaccctcatccgccacgctcaccaagcttggggcc
ctcgtgtggcagaaggtggtgcacgagcaccagggctggcgcctcctttccagcatgtgg
ctgcacgccggcgtcgtgcacctggtggccaacatgctcagcctcctcttcatcggcatg
cgcctcgaacagcagttcggatacgtgaggatcggggtggtgtacctcctgtccggcctc
ggcggcagcgtgctgtcgtccctgttcatcaggaacagcatctccgtgggcgcctccggt
gctctcttcggcctcctgggcgccatgctctctgagctcctgaccaactggaccatctac
accaacaaggtggccgccgtgctgaccctcctgttcgtggtggcggtgaacctggtgctg
ggcatcctcccgcacgtcaacaacttcgcccacatcggcggcttcctcacggggttcctc
ctggggttcgtggtgctgatgcgcccgcacttcgcctggatggagcgctacagcatgccc
gccggcagcgcctgcacatccaagaagtacctcctctaccagtggatcctcatggccgtc
gccctcgtcctcctcgtcatcggattcgcggtgggcatggcgatgctcttccgcggcgcc
aacgccaacgacagctgctcctggtgccgctacctcagctgcgtgcccacctcgagctgg
aagtgcaccaactga
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integrated database retrieval system
