Setaria viridis (green foxtail): 117838200
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Entry
117838200 CDS
T07951
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117838200
03009 Ribosome biogenesis [BR:
svs03009
]
117838200
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117838200
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117838200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
117838200
NCBI-ProteinID:
XP_034574022
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Position
9:complement(1316538..1321990)
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AA seq
666 aa
AA seq
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MAGAGSDLQSPKKRKREHAEGKIKPRPQVKGGGDGAKRKKHPGAGGYAAHGGAGEAPAKK
RPVTPKEKRLAAKEMSEARKMKRKRHYSLEKELAKLWEKMRCHDVSKEERSKLVSQAIRK
MDGKYLDIAGSHVTARVLQTCVKWCSQSERDAIFDDLQPHLLTLSRKKYAVFLVKKLIEL
ATKKQFASFISSLHGHVAKLLPHTIGAAVVDYAFQRATPPQKRQLLLELYSTELQLFKDL
TVQSSFSLLETISKLGLQKSSVLQYMTIEIQKILEKGTVEYSIVHTAILEYFTIADKTSA
MDVIHQLIPLLTQGASIIDGDEPSIATELPNKTKAKKKRLSEPLIVRIMQTREGLKLAIS
CLKHGSAKDRKKIIKSLKGQIMKLALNDFGCLFLISIISIVDDTKLVSKIVIQELAKHLK
ELIFDKNGRRPLLQLLHPLCSRYLSPADLACLSYNVPSLSAKEGEASEGATEVISENKVD
AMTDKEPDDLEGMQIVSESKKDPSRRRHELLIKSDLAEALVQSCIENVGELLRSNFGKEL
LYEVAVGGKDNVLEGVTDRIHMLHDAIASDAAQPKTEDIEHAFENFFSSRVIRRMIIDCP
AFAVTLWRKALKGKCKIWAEGHSSKVVAAFLESPSSEVRNLAKPELQPLIDTGILKVPDH
KGAVEK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccggcagcgatctccagagcccgaagaagcgcaagcgcgagcacgcggag
gggaagatcaagccgcggccgcaggttaaggggggaggggacggagcgaagcggaagaag
cacccgggcgccggcggttacgcggcccatggcggcgcaggcgaggctccggcgaagaag
cggccggttacccccaaggagaagcgcctggctgcaaaggagatgtcggaggcgaggaag
atgaagaggaagcggcattacagccttgagaaggaactagcgaaactatgggaaaagatg
agatgccacgatgtgagcaaagaggagagatccaagctagtaagtcaggccatccggaaa
atggatgggaaatacttggatattgctggatcccatgttactgcacgtgttctgcaaaca
tgtgtaaagtggtgctcacagtcagagagggatgctatttttgatgatctacagccacat
ttgctcactctttctcgcaagaaatatgctgttttccttgtaaagaagcttatagagctt
gccactaaaaagcagtttgccagtttcatctcttctcttcatggccatgttgccaaactt
cttcctcataccataggggctgcagtcgttgactatgcatttcagcgagcaacaccacct
cagaaaagacagttgttattggaactgtactccactgaacttcagctattcaaggatctg
actgtgcaaagttccttcagtttgttagagacaatttccaagcttggattgcagaaatca
tctgtcctgcagtatatgactattgagattcagaaaatcttggagaaaggtactgttgag
tattccatagtacacacggctatactggagtactttacaattgcagataagacctcagcc
atggacgtgattcatcaacttatcccccttctaactcaaggagcatcgatcatagatgga
gatgaaccatcaatcgctactgaactaccaaataaaacaaaagctaagaagaaaaggttg
tcagagccgcttatcgttcggatcatgcagacaagggaaggattaaaactagcaatcagt
tgcctcaaacatggcagtgcaaaggacagaaagaagattattaaaagtttgaagggtcaa
attatgaagcttgctctgaatgattttggatgccttttccttattagcattatttccatt
gttgacgacacaaagcttgtttctaagattgtgattcaagagctggcaaagcatttgaaa
gaactcatttttgacaagaatgggagacgaccgttgctgcagctacttcaccctctttgc
tcacgctatctgtctccagctgatctggcttgtctgagctataatgtgccttctcttagt
gcaaaggagggtgaggcatcggagggtgctactgaagttatatcagaaaataaagtggat
gctatgactgataaagagcccgatgatttggaaggcatgcagattgtgtctgagagcaag
aaggatccatcacgaaggcggcatgaattgttgatcaaaagtgaccttgctgaggctctt
gtccaatcttgcattgaaaatgttggagaattacttcgatcaaattttggcaaagaatta
ttatatgaggttgctgttggtggaaaagacaatgttttggagggtgtcaccgataggatc
cacatgttgcatgatgcaattgcttcggatgcagcccagccaaagacggaagatattgaa
catgcctttgagaacttcttttccagccgtgtaatcagaagaatgataatcgactgtcca
gcgtttgcagtcactctatggagaaaggctcttaaagggaagtgcaagatatgggctgaa
ggacacagttctaaggtggttgcagcgttcctggaatctccaagttctgaggtgaggaat
cttgcaaaacctgagctgcaaccgctgattgatactggcattctgaaagtgccagatcat
aaaggagctgtggagaaatga
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