Setaria viridis (green foxtail): 117838320
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Entry
117838320 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117838320
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117838320
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117838320
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117838320
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117838320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117838320
NCBI-ProteinID:
XP_034574188
LinkDB
All DBs
Position
9:51887655..51892018
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AA seq
366 aa
AA seq
DB search
MGAASSRLEKALGEQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYASNKS
TGDVEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL
LNELVDILEKEHNAARESLQNLSLQKNSNGPINGLPNGCHKESAATWVHKCFQGILTNET
RCLRCETVTDRDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQK
RMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLELKLLNTVDNSDLEYSLFAVVV
HVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFYE
SLAEKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggcgagctccaggctggagaaggcgctgggcgagcagttccccgagggcgag
cgctacttcggcctcgagaacttcggcaacacctgctactgcaacagcgtcctgcaggca
ctttatttttgtgttcctttccgtgatcaattgctggagtactatgcaagcaataaaagc
accggagatgttgaagagaacatgctaacctgcctggctgatctgttctctcagatcagt
aatcagaagaagaaaactggagtcattgctcctaagcgttttatacaacgattgaagaaa
cagaatgaaattttccgcagttatatgcatcaggatgctcacgagtttctgaatttttta
ctgaatgagctcgttgacattctagagaaggaacataatgctgcaagagagtcccttcaa
aatctctcattgcaaaagaattccaatggccctattaatggcctacccaatggctgtcac
aaagaatcagctgctacatgggtccataaatgcttccagggaatattgactaatgaaaca
agatgtctgagatgtgaaactgtgactgatagagatgaaacattttttgacctgagcctg
gacattgaacagaatagttcaatcacgagctgtcttaagaacttcagctcgacagagact
ttgaatgccgaggataagttcttctgtgacaaatgttgcagtttacaggaagctcagaaa
agaatgaagataaagaaaccaccaaacatcctggtaattcatctcaagcgtttcaagtat
attgagcaacttcagcgctacaagaagctatcatatcgagtggttttcccgctggagctt
aaacttctcaacactgttgacaactcagacttggaatactccctttttgctgtggtagtt
catgttggaagtgggccaaatcatggccactatatcagcttggttaagagccacaatcat
tggttattcttcgatgatgagaatgttgagatgactgacgagtccatggtacaggcattc
tttggctcaccacaagagttcagtggcaacactgataatggctacattctcttctatgaa
agccttgcagaaaaaagttga
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