Setaria viridis (green foxtail): 117838367
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Entry
117838367 CDS
T07951
Name
(RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00030
Pentose phosphate pathway
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
svs_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
117838367
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117838367
Enzymes [BR:
svs01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
117838367
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Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
117838367
NCBI-ProteinID:
XP_034574262
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Position
9:3939064..3941338
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AA seq
299 aa
AA seq
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MEAIVRAGVSSSAPAQLRPCPMPCRNRCLPSSVRRPGRRGVACSASAADADVVDLFDAAK
LTVDRFVQSGMVVGLGSGPASALAVQYLGTRLRRGSLTEIVAVTSSVLSASEADKAGIRA
SSYQEGTQIDFAFTDAEVIEEGTLAAVIGRRKTESGEPSFMVEKAMVKSADKLAFITGND
KYLTGVEGSIPVIVKSGNWIDTAEEIDDLFLGDAEVWRRPSFGTAGPLGGDHPLVTKEGH
HVLDVIFTTPIPDLGQVAEKLDKVAGVVDHGIICSNQSYAVIASKGEVQVIEEKPSVIP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatagtcagggcaggtgtatcttcctcggcgccggcgcagctacgcccgtgc
ccgatgccgtgccgcaaccgctgcctaccgtcctccgtgcgccgtcccggacgccgggga
gttgcctgctcggcctcggcggccgacgccgacgtcgtcgatctcttcgatgccgccaag
ctcacggtggacaggttcgtgcagagcggcatggtggtcgggctaggctccggcccggcg
tccgccctggcggtccagtacctcggcacgcgcctccgccggggatctctcaccgaaatc
gtcgcagtaacctcgtccgtgctcagtgcgagcgaggcagacaaggccggaatacgggct
agcagctatcaggaaggaacccaaattgattttgctttcactgatgctgaagtaatcgaa
gagggcacgctggctgccgtcatcgggcggcgcaagaccgagagtggagagccctctttc
atggtggagaaggcaatggttaaatcagctgataaacttgccttcatcactggaaatgac
aaatacctgacaggtgttgagggttccattccagtcatagttaaaagtggaaattggata
gacactgctgaagagatcgacgatttgttcctaggggatgcagaggtttggaggaggcca
tcatttgggactgccggtccactagggggtgatcacccattggtcactaaggagggtcat
cacgttcttgatgtgatctttacgactccaatcccagatctaggtcaggtagcagagaag
ttggacaaagttgctggcgttgtggatcatgggattatttgtagcaaccaatcgtatgcg
gtgattgcatccaagggggaagtgcaggttattgaggagaaaccctcggtgataccgtag
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