Setaria viridis (green foxtail): 117838382
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Entry
117838382 CDS
T07951
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117838382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117838382
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117838382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
CCDC113_CCDC96_CC
DUF3810
Allexi_40kDa
Tup_N
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
117838382
NCBI-ProteinID:
XP_034574280
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All DBs
Position
9:complement(5879437..5881892)
Genome browser
AA seq
281 aa
AA seq
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MAATTPAAAPRHSCAKLSVAVEDPKAAAAAGGGAVFVRATWLPTRFSLAVTDGAGAWVAD
ASDAEVRLRAEQWDQPVAEYLALAERYLAFHQPDSTYSFHDAGKGNRRLSWTFEKQGTKL
EWRWKLQPSPNAQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEADKCLQQSERFNN
EKAEFEQATFSKFVAVLNSKKTKLRQLRDKVAELESADKPPKEEEEENSTDRTEQFEGGS
DKEASVNDEPSETGSGDHHSSPEKSAATSQGRGRGRKRAKN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacgacccccgcggcggcgccgaggcacagctgcgcgaagctgtcggtggcg
gtggaggaccccaaggcggcggcggcggccggcggcggcgcggtgttcgtcagggccacg
tggctccccacccgcttctccctcgccgtcacggacggcgccggcgcctgggtcgccgac
gcctccgacgccgaggtgcgcctccgcgccgagcagtgggaccagcccgtggccgagtac
ctcgccctcgccgagcgctacctcgcctttcaccagcccgactccacctactccttccac
gacgccggcaagggcaatcgcaggctatcatggacttttgaaaaacaaggtaccaagctg
gaatggcgttggaagctgcagccatcacctaatgcgcagcaaactatatctgagattctg
gattttcttatggatgcaaatatccgcttgagtgaagaggttgttaggaaaacgcaatcc
ttcgacaagttgaaacaagaagctgacaagtgcttgcaacaaagtgaaagatttaataat
gagaaggctgaatttgaacaggccaccttttcaaagtttgtggctgtcttgaattcgaag
aaaaccaagctcagacagctcagggacaaagttgctgaactcgaatcagctgacaagcct
ccaaaggaggaggaagaggagaactcgacagaccgaacagagcagttcgagggaggaagc
gacaaagaggcaagcgtcaacgatgaaccctccgagactggcagcggcgatcatcatagc
tctcctgagaaatctgcagccacctcccaaggaagggggagaggtcgcaagagagcaaaa
aactag
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