Setaria viridis (green foxtail): 117838399
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Entry
117838399 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20222
importin-5
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117838399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117838399
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117838399
Pre-60S particles
117838399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
HEAT
Importin_rep_6
TOR1L1_N
HEAT_2
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
Cnd1
Htt_N-HEAT_1
Arm
Adaptin_N
TPR_TNPO3_IPO13_3rd
HEAT_Maestro
DNA_alkylation
ARM_ECM29_C
Phasin_2
Motif
Other DBs
NCBI-GeneID:
117838399
NCBI-ProteinID:
XP_034574304
LinkDB
All DBs
Position
9:complement(7866045..7875078)
Genome browser
AA seq
1107 aa
AA seq
DB search
MDPQADAAAVLGADPAALTALLADLTSPANEARSRAEQQFHALRGSHPDALALSLAHLLL
SPAHPSAPMAAVLLRRLIAPSSQAFVYPALAPATQSSLRALLLSAASAPALPRSVSRKLS
DAVAELASFLLPSNAWPDLLSFLYKSIDSQSSPPGLQESALNILARLASHLAAVFPNLHG
LLLAALSHPSSADVRVAGLNAAISLIQSLPSAGARDQFQDLLPAMMRALAESLNCGNEGS
AQEALEMMIELAGAEPRFLRRQLPDVVASMLQIAEAPGLEDGTRHLAVEFVVTLAEARER
APGMMRKLPRYVGRLFAVIMTMLLDVQDEPAWHAAVSEEEDAGETGSYVFAQECLDRLAI
AVGGNTILPVAAELLPSFFSSEDWKRRHAALVTIAQIAEGSAKVMIKNLEQLVGMVLNSF
QDPHPRVRWAAINAVGQLSTDLGPELQNQLHHVVLPALASAMDDVQNPRVQAHAASAILN
FSENCRPDILTPYLDGIVGKLLLLLQTGNQMVQEAALTALASAADSSQEHFQKYYDAVMP
YLKAILMNATDKSNRMLRAKSMECISLVGMAVGKQKFKDDAKQVMEVLMTLQGSQMEADD
PITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVSVTSAGPEDGESDDEGVE
TITLGDKRIGIRTSLLEEKATACNMLCCYADELKEGFFPWIDQVTTTLVPLLKFYFHEEV
RKAAVSAMPELLRSAKLAIEKGQAQGRDKSYLKQLSDYIVPALVEVMHKEPEPQICASIL
ESLNESIQISGTLLEENQVRSVVEGVKEVIVASANRRIERTERAKAEDFDSEEEELLREE
NEQEDEIFDQVGDCLGTLAKTFKTYFLPFFDELSMYLTPMLGKDKTSEERRIAICIFDDV
AEHCREAAVRYYDAYLPSLLEACTSENPDVRQAAVYGIGICAEFGGSAFRPHTGEALSRL
YNVIKHPNALDLDNAMAYDNAVSALGKICQFHRDSIDASQVIPAWLSCLPIKNDLIEAKL
VHEQLCAMLEKSERELLGHNNQYLAKIVSVFAEILCAGKDLATEQTASRMINLLRQLQTT
LPPSVLASTWSSLQPQQQLALQSVLSS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaggcggacgcggcagcggtgctgggcgccgacccggcggcgctgacggcg
ctgctggcggacctgacctccccggccaacgaggcgcggtcgcgggcggagcagcagttc
cacgcgctgcgcgggtcccacccggacgcgctggcgctgagcctcgcgcacctgctgctc
tccccggcgcacccctccgcgcccatggccgccgtgctgctgcgccgcctcatcgccccg
tcgtcccaggccttcgtctaccccgcgctcgcgcccgccacgcagtcctcgctccgcgcg
ctgctcctctccgccgcctccgcgcccgcgctccccaggtccgtctccaggaagctctcc
gacgccgtcgccgagctcgcctccttcctcctgccgtccaacgcgtggcccgacctgctc
agcttcctgtacaagtccatcgactcccagtcctcgcctcctgggctgcaggagtcagcg
ctcaacattctggcccgcctggcctctcacctcgccgccgtcttccccaacctccacggg
ctcctcctcgccgcgctgtcccatccctcctccgccgacgtccgcgtcgcagggctcaat
gcggccatcagcctcatccagtcccttccctccgccggggcccgcgaccaattccaggac
ctcctcccggccatgatgcgcgctctcgccgagtcgctcaactgcgggaacgagggctcc
gcgcaggaggctctggagatgatgattgagctcgctggcgcggagccgcggttcctgcgc
cgccagcttccggacgtggtcgcctccatgctgcagattgccgaggccccaggactcgag
gatggcacccgccaccttgccgtcgagtttgttgtgaccctcgctgaggcaagggagcgt
gctcccgggatgatgcggaagctgccgcggtatgttgggcggctctttgcagtgattatg
actatgctgctcgatgtccaggatgaaccggcgtggcatgccgctgtgtcagaggaagaa
gatgctggagagaccggaagctatgtcttcgcacaggagtgtctggaccggctggcaatt
gctgttggtggtaatacgattctgcccgttgcagctgagttgcttccatcatttttctcc
tctgaggattggaagaggcggcatgcagcactggtgacaatagcgcagattgcagagggt
tctgctaaggtgatgattaagaatctggagcagttggttgggatggtgctgaattcattc
caggatcctcatcctcgggtgaggtgggcagcgattaatgcagtagggcagctttcaacg
gatctgggacctgagttacaaaatcagttgcaccatgttgtactacctgcactggcttca
gcaatggatgatgtccagaacccacgcgtacaggcacatgctgcatcagctatcctaaac
ttcagtgaaaactgtagaccggatattttgacaccatacctggatggaatagttgggaaa
cttctattgttgcttcagactggaaaccaaatggtgcaagaggctgctctaactgcttta
gcatcagcagcagattcttctcaggaacacttccaaaaatattatgatgcagtaatgcca
tacctcaaggctattcttatgaatgcaactgataaatccaacagaatgttgcgtgccaaa
tctatggaatgcatcagtttagttggtatggcagttgggaaacagaagtttaaggacgat
gctaaacaggtgatggaagttctcatgactctgcaaggatctcagatggaggctgatgac
cctataacaagttacatgctgcaagcatgggcaagactgtgtaaatgccttggtcaggat
ttcttaccatacatgagtgttgttatgccgcctctgctccagtctgctcagctcaaacca
gatgtgagtgtcacctctgctggaccagaagatggtgaatctgatgatgagggtgttgag
actattacactgggtgataagagaattggcatccggactagtctactggaggagaaagct
acagcatgtaatatgctgtgctgctacgctgatgagctcaaggaaggttttttcccatgg
attgatcaggttacaactacacttgtacctctcctcaagttctatttccatgaagaagtt
aggaaggcagctgtttcagcaatgccagagcttttacgttcagcaaaattggctatagaa
aaaggtcaagctcaaggtcgtgataaatcttatcttaagcaactatctgattacatagtt
ccagcccttgtagaggtcatgcacaaagaacctgagccacaaatttgtgcaagcatactg
gaatcattgaatgagtccatacagatatctgggacacttcttgaggaaaatcaagtaaga
tctgtagtggagggagtaaaagaagttatagttgcaagcgctaataggaggatagaacga
acagagagagcaaaggctgaagactttgattctgaagaagaggaactactcagagaagaa
aatgaacaggaggatgagatttttgaccaagttggtgattgtctaggcactcttgccaaa
acattcaagacatattttcttccattctttgatgaactctccatgtatttaacacctatg
ttgggaaaggataaaacatcagaagaaagaaggattgccatatgcatttttgatgatgtc
gctgaacactgtcgtgaagcagcagttaggtattatgatgcatatctcccttctctatta
gaagcctgcacaagtgaaaatccagatgttaggcaggctgcagtttatggaattggcatc
tgtgctgaatttggtggttctgcatttaggcctcacactggggaggccctatccagatta
tacaatgtaatcaaacatcctaatgcgctggatttggataatgcgatggcatatgacaat
gctgtatctgctcttggaaagatatgtcaattccatcgtgatagcatcgatgcatctcag
gtcattcctgcttggttaagttgcctgccgataaaaaatgatttaattgaggccaagctt
gtccatgaacagctgtgtgcaatgcttgagaagtctgagagggagcttttgggtcataat
aatcagtaccttgcaaagattgtgtctgttttcgcagagatattatgtgctgggaaagat
ctagcaacagaacagaccgccagcaggatgattaatctattaaggcagcttcagacaacg
ttgcctccttcagtattagcgtcgacatggtcttctttgcaaccacaacagcagcttgct
ctacaatctgtgctgtcgtcatag
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