Setaria viridis (green foxtail): 117838405
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Entry
117838405 CDS
T07951
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00541
Biosynthesis of various nucleotide sugars
svs01100
Metabolic pathways
svs01250
Biosynthesis of nucleotide sugars
Module
svs_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
117838405
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
117838405
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
117838405
NCBI-ProteinID:
XP_034574316
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Position
9:complement(47499457..47502701)
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AA seq
672 aa
AA seq
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MATYEPKNILITGAAGFIASHVANRLIRNYPHYKIVVLDKLDYCSSLKNLNPSRSSPNLK
FVKGDIASADLVNYLLVTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETEEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYSEDVAEAFEVVLH
KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKRL
GWAERTPWEEGLKKTIEWYTTNPDYWGDVAGALLPHPRMLMTPGVERHNWTEEIKSLFSS
PAEVSTTAPAASTKSTTNAPQSSSYKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGRLEE
RSQLLEDIRNVKPTHVLNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCCEQGLLM
INYATGCIFEYDAKHPEGSGIGFKEEDTPNFRGSFYSKTKAMVEELLKEYDNVCTLRVRM
PISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPFSIEMAKRDCRGIWNFTNPGVVN
HNEILEMYRKYINPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKAEFPELLSIKDSLIK
YVFEPNRKVPAN
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttatgagcccaagaacattctcataaccggcgctgctggtttcattgcatcg
catgtagccaaccgcctgattaggaactacccgcactacaagattgttgtcctcgacaag
ctcgactactgctctagcctaaaaaacctcaacccttcacggtcttcaccaaatttgaag
tttgtcaagggtgacattgcaagtgctgatctggtaaactaccttctggtcacagagtcg
attgacaccatcatgcactttgctgctcagacacatgtggataattcttttggcaattcc
tttgagttcacaaagaacaacatatatggtacccacgtccttcttgaggcttgcaaggtt
actggtcagatcagaaggtttattcatgtcagtactgatgaggtgtatggagaaaccgaa
gaggatgctgtggttggcaaccatgaggcctcacagctgcttccaacaaatccatattcg
gcaacaaaagctggggctgaaatgcttgtgatggcttatggtaggtcttatggtcttcct
gtgattaccactcgggggaacaatgtgtatgggccaaaccagttccctgagaaactcatt
cccaaattcattcttttggccatgagaggtctgcctcttccaatccatggagatggttcc
aatgtcaggagttacctgtacagtgaggatgtagctgaagcttttgaagtggttcttcac
aaaggagaggttggacatgtgtataatattggtactgtgaaggagaggagggtgattgat
gtggccaaggacatatgcaagctatttggtttggatactgagaaagtcatcaggtttgtt
gagaacaggcccttcaacgaccagaggtactttttggatgatcagaagctaaagagattg
ggatgggcagagcgcacaccttgggaagagggtttgaagaaaacaattgaatggtacacc
accaatcctgattactggggagatgtagctggtgctttgctccctcatccaaggatgctg
atgactcctggagttgaaaggcataactggactgaggaaatcaagtctctgttttcttca
ccagctgaagttagcactacagctcctgcagccagtaccaaaagcaccactaatgccccc
caaagttcttcctacaagttcttaatctatggtaggactgggtggattggtggcctcctt
ggaaagatttgtgagaagcaaggaataccatatgagtacgggaaaggacgcttggaggag
cgctctcagctgttggaggacattagaaatgtgaagccgactcacgttttaaatgctgct
ggggtcactgggagaccaaatgttgactggtgcgagacccacaaacaggacacaatccgg
accaatgttgtgggcaccttgaatcttgctgatgtttgttgtgagcagggtttgctcatg
attaattatgctacaggctgtatatttgagtatgatgctaagcaccctgaagggtctggt
attggctttaaagaggaagacacacccaactttagaggttctttctattctaaaactaaa
gcaatggtggaagagctattgaaggagtatgataatgtgtgtactcttagagtcaggatg
cctatatcatcagatctaagcaaccctcgtaacttcatcacaaagatagctcgttacgac
aaggtggtgaacattcccaacagcatgacaattttggatgagcttctgcctttctccatc
gagatggcgaagcgggattgcaggggcatatggaacttcaccaaccctggcgtcgtcaac
cacaatgagattctggagatgtacaggaagtatatcaatcctgacttcaagtggaccaac
ttcacacttgaagagcaggccaaggttatagttgctcccagaagtaacaatgagatggac
gcatcgaaattgaaggctgagttccctgagctgctgtccatcaaggattctttgataaag
tacgtctttgagccaaacaggaaggttcctgctaattga
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