Setaria viridis (green foxtail): 117838412
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Entry
117838412 CDS
T07951
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00450
Selenocompound metabolism
svs00970
Aminoacyl-tRNA biosynthesis
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117838412
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117838412
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117838412
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117838412
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117838412
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117838412
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117838412
Prokaryotic type
Other AARSs
117838412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
117838412
NCBI-ProteinID:
XP_034574324
LinkDB
All DBs
Position
9:50530285..50536202
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AA seq
804 aa
AA seq
DB search
MASSSSSPPPPPKLPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
AIYICGTDEYGTATETKAMEEKCTPKEICDKYHAIHDEVYKWFNIKFDKFGRTSSPEQTE
VCHAIFHKLMENNWLTENTMQQLYCDTCQRFLADRLVEGTCPNKVCNASARGDQCESCST
LLNPTELIDPKCKVCKNTPRIRDTDHLFLELPLLKDKLVNYINETSVAGLWSQNAIQATN
AWLKEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDP
DSVELFQFMGKDNVPFHTIMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGIGVF
GNDARDTNLPPEVWRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAK
PAGAGYDSIVPDAPNAESHPLTKALAEKTSKWVEQYLDAMEKVKLKQGLKSAMAISSDGN
AYLQESQFWKLYKEDSAACAIVMKTSVGLVYLLACLLEPFMPSFSEEVLRQLNLSPEENL
SFSEEKGEIAKAKSPWDFVPAGHKIGKPAPLFKELRDEDVALHREKYAGSQAERSSKAAA
DAEANKVANQLKGTKLSGGGPKKEQKKQSGGSKSKTAEADITVAKLDIRVGLIRKAEKHP
DADSLYVEEIDVGEDAPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLA
ASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLSGKSKTWEKLAAELHSNGELVAC
YKDVPFTTSAGICKVKTIANGEIR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctcctcctcgccgccgccgccgccgaagctgccgatccccggtcgccgc
aacatactcatcaccagcgcacttccgtatgtcaataatgttccccatctcggcaacatc
atcggctgtgtgctcagcgctgatgtgttcgcgcggtactgccggctccggggttataac
gcaatctacatatgcgggactgatgagtacggcaccgccaccgagacgaaagccatggag
gagaagtgcacacccaaggagatctgcgacaagtaccatgctatccatgatgaagtttac
aagtggtttaacataaaatttgataagtttgggcgcacgtcctctcctgagcaaacagaa
gtctgccatgcaattttccataaattgatggaaaataattggctcacagaaaataccatg
cagcagctttactgtgatacatgtcaaagatttttagctgatcggcttgttgaaggaaca
tgcccaaacaaagtctgtaatgcatcagcacgaggagatcagtgtgaatcatgcagcact
ttgttgaatccaaccgaacttatcgacccgaagtgtaaggtttgtaagaatactccacgt
attcgtgacactgatcacttattcttggagcttcctctattgaaagacaagttggtaaac
tacatcaatgaaacttcagtagccggtttgtggagtcaaaatgctattcaagcaacaaat
gcatggctgaaggaagggctaaagccgcgctgcatcaccagagatcttaagtggggtgtt
cctgtaccccacgagaagtataaagacaaggtgttctatgtttggtttgatgcacctatc
ggttatgtttctattacggcatcctatacacctgattgggagaagtggtggaaggatcct
gatagtgtagaattgtttcagtttatgggcaaagataatgtgccatttcacacgatcatg
ttcccttcaacactacttggaactggggaaaagtggacaatgatgaagacaataagtgtt
actgaatatctaaattatgaagcaggaaaattctccaagagtaaaggtattggagtcttt
ggtaatgatgcaagggatacaaatcttcctcctgaagtatggcgatactacctgcttatg
aatcgccctgaggcatcagatacactctttacttgggctgatttgcaagccaaattgaac
agcgagttgctgaacaacttggggaacttcatcaatcgtgtgctaagtttcgttgcaaaa
ccagctggagctggatatgattctattgtacctgatgctcctaatgcggaatcacatcca
ttgacaaaggcgcttgcagaaaaaactagtaaatgggttgagcaatatctcgatgcaatg
gaaaaggttaaactgaagcaaggactgaagagcgcaatggccatttctagtgatggaaat
gcgtatctgcaagagagccagttttggaaactttacaaggaagattcggcagcatgtgca
attgtgatgaaaacttcagttggtcttgtctacctccttgcctgtcttctggagcctttc
atgccgtcattctctgaagaagtattacgtcaattgaacttgtcccctgaagaaaacctg
tcattcagtgaagaaaaaggagaaattgcaaaggccaaatctccttgggattttgtacca
gcagggcacaaaattggaaagcctgcccctctgttcaaggaattgagagatgaagacgta
gctctccacagagaaaaatatgcgggtagccaagctgagagaagctcgaaagcagcagct
gatgctgaagccaacaaagtcgctaaccagctcaagggcacgaaattatctggtggaggt
ccaaagaaggaacaaaagaaacaatctggtggttcaaaatcgaagacagcagaggcagat
attactgttgcaaaattggatattcgggtggggcttatcaggaaagcagagaagcatcca
gatgctgattccctttacgtagaggagatcgatgttggagaggacgcaccaagaacagtg
gtcagcggtctcgtgaaattcatacctcttgaagaaatgcagaaccggaaagtttgcgtt
ctctgcaacctgaaaccggtggcaatgcgcggtataaaatcacacgcaatggttttggct
gcatcaaatgaggaccacacgaaggttgagttggtggagccaccggaatctgctgccgtg
ggggagcgcgtcacctttgctgggtactccggggagcctgaggcttccctcagcggcaag
agcaagacgtgggagaagttggccgccgagctgcacagcaacggcgagcttgtggcgtgc
tacaaggacgtgcccttcacaacctcggctgggatctgcaaggtcaagacaatagcaaat
ggagagattcgctag
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