Setaria viridis (green foxtail): 117838445
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Entry
117838445 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 10
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117838445
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117838445
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117838445
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
117838445
NCBI-ProteinID:
XP_034574372
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Position
9:complement(52394832..52398277)
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AA seq
542 aa
AA seq
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MAREQALLSTEIVNRGVEPSGPDAGSPTFSVRVRRRLPDFLQTVNLKYVRLGYHYLISHG
VYLATIPVIVLVCGAEVGSLSRDELWNKVWGEATYDLATVLAFLAVLAFTISVYIMSRPR
PVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMPRCV
FEPNVNCATMKEGRAEASTAMFAALDELFDKCRVRPKDVGVLVVNCSLFNPTPSLSAMIV
NHYKMRGNILSYNLGGMGCSAGVIAIDLARDMLQASGAGLAVVVSTEAVSFTWYPGKRRS
MLIPNAFFRAGCAAVLLSNRRRDFHRAKYQLEHVVRTHKGADDRAFRSVYQEEDEQRIKG
LSISRDLLEVGGHALKTNITTLGPLVLPFSEQLLFFAGVLFRHLFPSKTSTPPPATTPGD
ASAAAPYIPDFKRAFEHFCMHAASRDVLEHLQSNLGLRDGDLEASRAALHRFGNTSSSSI
WYELAYLEAKGRVRRGDRVWQLAFGSGFKCNSAVWRAVRRVRRPSRSPWLDCVDQYPARM
DA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggagcaggcgctgctctcgacggagatcgtgaaccgcggcgtggagccgtcg
gggccggacgccgggtcgccgacgttctcggtgcgcgtgcgccgccggctgccggatttt
ctgcagacggtgaacctcaagtacgtgcggctggggtaccactacctcatcagccacggc
gtgtacctggccaccatcccggtcatcgtgctggtgtgcggcgccgaggtgggcagcctc
agccgggacgagctgtggaacaaggtgtggggggaggccacctatgacctcgccaccgtg
ctcgccttcctcgccgtcctcgccttcaccatctccgtctacatcatgtccaggcccagg
cccgtctacctcatcgacttcgcctgctacaagcccgccgacgagctcaaggtgtccaag
gcggagttcatcgacctggctcgcaagtcgggcaagttcgacgaggatagcctggcgttc
cagtctcggctgctcgccaagtccggcatcggcgacgagtcctacatgccgcgctgcgtc
ttcgagcccaacgtcaactgcgccaccatgaaggagggccgcgcggaggcgtccacggcc
atgttcgccgccctggacgagctcttcgacaagtgccgcgtccgtcccaaggacgtgggc
gtgctggtcgtcaactgcagcctcttcaacccgaccccgtcgctgtcggccatgatcgtg
aaccactacaagatgcgcgggaacatcctgagctacaacctcggcggcatggggtgcagc
gcgggcgtcatcgccatcgaccttgcacgcgacatgctgcaggcgagcggcgcggggctc
gccgtcgtggtgagcacggaggcggtctccttcacgtggtaccccgggaagcggcggtcg
atgctgatcccgaacgccttcttccgtgcgggttgcgcggcggtgctgctctcgaaccgg
cggcgcgacttccaccgcgccaagtaccagctggagcacgtggtgcgcacgcacaagggc
gccgacgaccgggcgttccggtccgtgtaccaggaggaggacgagcagcggatcaagggc
ctgtccatcagccgcgacctgctagaggtgggcgggcatgcgctgaagaccaacatcacc
acgctggggcccctggtgctgcccttctcggagcagcttcttttcttcgccggggtgctg
ttccgccacctgttcccttccaagacctccacaccgccgccggcgacgacacccggggac
gcctccgccgcggccccttacatcccggacttcaagcgcgcgttcgagcacttctgcatg
cacgcggcgagccgcgacgtgctggagcacctgcagagcaacctgggcctgcgcgacggc
gacctggaggcctcccgcgcggcgctgcaccgcttcggcaacacctccagcagcagcatc
tggtacgagctggcgtacctggaggccaagggccgcgtccgcaggggcgaccgcgtgtgg
cagctcgccttcgggtccgggttcaagtgcaacagcgccgtgtggcgcgccgtccgacgc
gtgcgccgcccgtcgcgcagcccctggctggactgcgtcgaccagtacccggcgcgcatg
gacgcctag
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