Setaria viridis (green foxtail): 117838495
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Entry
117838495 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117838495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117838495
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117838495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
117838495
NCBI-ProteinID:
XP_034574432
LinkDB
All DBs
Position
9:complement(14146770..14156635)
Genome browser
AA seq
678 aa
AA seq
DB search
MPRKVVSGPDYDDEYDDYDEYDDDYDEYDDTGYGNDKHPVKTESLKKSSNMLPVHWTCSM
CTFDNHESMTYCEMCGVFRETFVKSAKDGSLKDSVRAVSSEPRTSAAPKTDSAKTPMKTR
AVDSDGCYARKNASTPCDKANSTQLPSAGSSLGAKKKKKTPVLSEEIPVERTALLVPDHF
QLKGDQSGGASSSSQNDSVIQKLSSDISQLNVDKNNVNVTKPCLPEEYKPEKWMLADQES
GVLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISRKDMHKNEKESKEKGKGSFAFAWAMDE
SSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDASTGS
FEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLVVAVNKMDAVAYSKERFEFIKLQLGSFLR
SCNFKDSAITWIPLSAVENQNLIKPPSDARLASWYQGFCLLDAIDSLQLPSRDVTKPLIL
PICDVIKSQSTGQLAAFGKLETGAIQIGSKVLVLPCGLEATVKTIERDTNSCSIARAGDN
VAVNLQGIDGNQLIPGGVLCHPGFPVAVANHLELKILVLDITIPILVGSQVEFHIHHAKE
AARVTKIIALLDKTGKPSKSAPRFLKSKQNAVVQVTLDVAVCVQEFSKSRALGRAYLRLS
GRTIAVGVVNRVIGQYEN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggttgtatccggacctgactacgatgatgagtacgatgactatgatgag
tatgatgatgactatgatgagtatgatgacaccggatatggcaacgataaacatcctgtt
aagacggaatcattgaagaagtcctcaaatatgttgcccgtgcattggacatgttccatg
tgcacgttcgataatcatgaaagcatgacatactgtgagatgtgtggggtttttcgtgaa
acttttgtcaaatctgccaaggatggttcattaaaagattcagtcagagcagtgtcaagt
gagcctaggacatctgctgcgccaaaaactgattctgccaagacgccaatgaagacccgt
gctgtagattctgatggttgttatgcgagaaaaaatgccagtacgccatgtgataaagcc
aattccacacagttaccatctgctggtagctcattgggtgctaaaaagaagaagaagact
cctgtactttctgaagaaatacctgtggagaggacagctctattggtccctgatcatttt
cagctgaagggtgaccagagtggcggggctagcagttcttcacagaatgattctgtgatc
cagaaactctcttctgacataagccagctaaatgtagacaaaaacaatgtgaatgttaca
aaaccttgtttgcctgaagagtacaagcctgagaagtggatgttagctgatcaggagtca
ggggtgctgagccagctaaaccttgcaatagtgggtcatgttgattctggcaagtcaaca
ctatctgggagattactgcatctattaggaaggatatcgagaaaagatatgcacaagaat
gagaaggagtcgaaagagaaagggaagggatcatttgcttttgcatgggccatggatgag
agcagtgaagaaagggaacgaggtgtgacaatgactgtggctgtggcttatctggagacg
aagaaataccgtgtggttttgcttgactcacctggccacaaagattttgttccaaatatg
atatctggcgcaacacaagctgatgcagccattcttgtggttgatgcttcaactggttct
tttgaagctggcatggatggtgaaggaggaaaaagtgttggtcagaccaaagagcacgct
cagcttattagaagctttggagttgaacagcttgttgtcgcagtcaacaagatggatgct
gttgcatactcaaaagaaagatttgagttcatcaaactacaacttggtagttttctgcgg
tcatgcaacttcaaagactcagctattacttggattcctcttagtgctgtagaaaatcaa
aatttgattaaacctccttcagatgctcgtttggcctcctggtatcaagggttctgtctc
ttggatgctatagattcactgcagcttccttctcgggatgttacaaagcctctcattctt
ccaatctgtgatgttatcaagtctcagtcaacagggcagctggcagcttttggaaaattg
gaaactggagctattcaaattggttcaaaggtgttagttttaccttgcgggctagaggcg
acagtgaaaaccattgagcgggacactaattcatgcagcatagcaagagctggtgacaat
gtggcagttaatttacagggtattgatgggaatcaactaatacctgggggggttctttgc
caccctggtttccctgtggctgtagctaaccacttggagcttaagattctagtcctggac
atcaccattccaattcttgttggttctcaggtggaatttcacatacatcatgccaaggag
gccgcaagagtaacaaaaatcattgcattgcttgacaagaccgggaaaccaagtaaatca
gcacctcgatttcttaaatcaaaacagaacgctgttgtacaggttaccctcgatgtggcg
gtctgcgttcaggaattctccaaaagtcgagcacttgggagggcatacttaaggttgtct
ggtcgcacgatcgctgttggtgtagttaatcgggtaattggccaatatgagaactag
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