Setaria viridis (green foxtail): 117838540
Help
Entry
117838540 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K24752
WD repeat-containing protein 70
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117838540
03036 Chromosome and associated proteins [BR:
svs03036
]
117838540
03400 DNA repair and recombination proteins [BR:
svs03400
]
117838540
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117838540
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
117838540
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
117838540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_DCAF4
Pep3_Vps18
PEP5_VPS11_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117838540
NCBI-ProteinID:
XP_034574496
LinkDB
All DBs
Position
9:17358319..17362676
Genome browser
AA seq
622 aa
AA seq
DB search
MADGGEMDEEAMRAFFPLSFGKAPARPSSAASSAAHSSTLRKPQNPSNPKPSASTAADDD
GGAVIGPPRPPPAPAGEDDDEDGGGMIGPPRPPPASAHGEGEHDEGGGMIGPPRPPPAED
DEEEDEDDDDDMEDDGDGGFNRIPLSNEIVLRGHTKVVSALAVDHTGSRVLSGSYDYTVR
MYDFQGMNSKLQSFRQLEPFEGHQVRSLSWSPTSDRFLCITGSAQAKIYDRDGLTLGEFV
KGDMYIRDLKNTKGHISGLTGGEWNPKSKETILTSSEDGSIRLWDVSDFKSQKQVIKPKL
VRPMRIPVTSCAWDHEGKRIVGGIGDGSIQLWTIKTGWGSRPDIHVEKTHTEDITGVKFS
TDGQILLSRSMDSTLKIWDLRRMKTPLKVFEDLPNHYAETNAAFSPDEQLIFTGTSIEKD
GDNGGLLCFFDRKKLELVSRVGISPHYSVIRCLWHPRINQVFATVGDKKEGGTHILYDPS
ISQRGALVCVGRAPRKKSVDDFEVQPVIHNPHSLPLFRDQPSRKRQREKILKDPLKSHKP
EAPVNGPGYGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAAEKDPKFIA
PAYSQTQPKPVFAESDSDNEGK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggcgagatggacgaggaggcgatgcgagccttcttcccgctctccttc
ggcaaggcccccgcgcgacccagctccgcggcctcctccgctgcccactcctccaccctc
cgcaagccccaaaaccctagtaaccccaagccctccgcctccaccgccgctgacgacgac
ggcggcgccgtgattggaccccctcggccgccgccggcgcccgcgggggaggacgacgac
gaggacggcggcggcatgatcgggccgcctcggcccccgccggcctccgctcacggcgag
ggggagcacgacgagggcggcggcatgattgggccgcctcggcctccgccagcggaggac
gacgaggaggaggatgaggacgacgacgacgacatggaggatgatggcgatggtgggttc
aatcggatccctctcagcaatgaaattgttctgcgggggcacaccaaggttgtctcagcc
cttgccgttgaccatacaggatccagagtgctctctggtagctatgattatacagtgcgc
atgtacgatttccagggtatgaattccaagctgcaatcattcagacaattggaacccttt
gagggccatcaagtccgtagcctaagttggagtccaacatccgatcgattcttatgcatt
actggttcagcgcaggccaagatttatgaccgtgatgggcttacgctcggcgagtttgtt
aagggtgatatgtatattcgtgatctgaagaatacaaaaggtcacatttctgggctgaca
ggtggtgagtggaatccaaagtcaaaagagactatattgacctcatctgaagatggatcc
atacgtctctgggatgtttcagactttaaaagtcaaaagcaggtcattaaacctaagcta
gtaagaccaatgcgaattcctgttacatcatgtgcatgggaccatgaaggaaaacggatt
gtgggtggcataggagatggttcgatacagctctggactataaaaactggatggggtagc
agaccagatatccatgttgagaaaacacatacagaggatattactggagttaaattttca
acagatggacagattcttctgtcaagaagtatggatagtactttgaagatatgggatctg
agaagaatgaaaactcctttgaaagtgtttgaagatttgccaaatcactatgctgagaca
aatgcagcctttagtccagatgagcaacttatttttacaggaacctcaattgaaaaggat
ggcgacaatgggggactactctgtttctttgatagaaagaaacttgagcttgtatcaagg
gtggggatttcaccacattacagtgtgataaggtgcctatggcatccaaggatcaaccag
gtgtttgctacagttggggacaagaaagaaggcgggactcatatcctttatgatccttct
attagtcagagaggtgctcttgtatgtgttggacgggcaccaaggaaaaagtctgttgat
gactttgaggtgcaacctgtcatacacaatccacattcattaccacttttcagagatcaa
ccaagtcgtaagcgtcaaagagagaagatactgaaagaccctctcaaatcacacaaacca
gaagcacctgttaatggcccaggttatggtggaagagttggaactacaaaaggcagctta
ctgacacagtacctcttgaaggaaggtggtttaattaaggagacctggatggatgaggat
ccaagagaagcaattttgaaatatgctgatgctgcagagaaagatccaaagtttattgcg
ccagcttattctcaaacccagccaaaacctgtgtttgcagagtctgattcagacaatgaa
gggaaataa
DBGET
integrated database retrieval system
