Setaria viridis (green foxtail): 117838602
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Entry
117838602 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117838602
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117838602
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117838602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_UBOX
Prok-RING_4
zf-rbx1
RING_XB3-XBAT31
zf-ANAPC11
zf-C3HC4_5
FKBP15
Motif
Other DBs
NCBI-GeneID:
117838602
NCBI-ProteinID:
XP_034574578
LinkDB
All DBs
Position
9:complement(15461211..15472089)
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AA seq
854 aa
AA seq
DB search
MSTCLHIQGPGKIAMSRPLDFAVLKYKNQRLAEQLEVHKFEYRTLEGRFNDLKEKQRTHN
ETLVLVKSHWERLLADLDLVSVCKNESLHSSCGTGQNNVQKERDFLNRLLEAGATESSGC
FPSHHLGNGVAPEQSSTVNVLQKAFLPSSDLWHVNNDLVYVALTKLPENEHSRQLHSATS
NIFSKLHKVIHAIDNLHLEHRQLAGNYQKQRDSSAWNRAEQKRLKEELTSAVAKLEESKH
KLAALKAQGDNKHGTPVLVPKLGNKDVSAEKVRDKQRELQDLEATHKELMELISKRLEEI
RRLHMERIEILNKLATFQDILTGFRNIRSSKAFELVNDQLQKSQAELDDHQTLLKKLQVD
TDSFVWQERQFNQKVDLAEIPQKVSAYCVSRIADLEKDVLKLCNEKNMLVLKLEEASREP
GRNQVISEFKALVSSLPREMGAVQSELSKHKDASLQLHSLRAEVSSLSSILTRKEQEIEQ
TSCRSAHAGSDISQLQSLVLDLKENIKELKLFVELYKHESTDSRQLIEYRDRELSEWARV
HVLKYSLNESKLEQRVIAANEAEAMSQQRLATSEAKIAELGQKLETSRRDLVRLSHILKS
KYEECEAYVVEIESIGNAYEDIMSQNQQLLQQIIERDDHNTKLFMEGVKAKQSHDALHLE
VSSLKRNLQHASMLMDLYNKKIVRLEDQLRGWSERVRRLSEDGMQQSISLGNSQRKLAGL
HGEAPKLMQSMDELQAKVGSNRLEVAELLTELEKERFSKKRIEDDLDLMSSKANSLREKK
DNSAVLQKLHHEVKEYRGILKCGVCHERQKEIVIAKCYHLFCNQCIQKSLGSRQKRCPSC
GLSFGVNDVKPIYI
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttgcctccacatccaaggtcctgggaaaattgctatgtctcgtccgcttgat
tttgctgtacttaaatacaaaaatcaaaggcttgcggaacaactggaagtccacaagttt
gagtaccgtactctcgagggtagattcaatgatttaaaagagaagcagaggacacataat
gagacacttgtcctagtcaaaagtcattgggagcgacttctagcagatcttgatttggtt
tctgtttgcaaaaatgaatctttgcactcgagctgtggtacagggcagaacaatgtacaa
aaggaaagggactttttaaatagacttttggaggctggtgccactgaaagttcaggttgt
tttcccagtcaccatctgggaaatggtgtcgctccagagcaatcatcaacagttaatgtt
ctgcagaaggccttccttccatcaagtgatctgtggcatgtgaataatgacttagtttat
gttgctctaactaagttgccagaaaatgaacacagcaggcaactgcacagtgctaccagt
aacatattttccaagcttcataaggtgatacatgcaatagataatcttcacttggaacac
aggcagctggcagggaactatcagaagcaaagagattcgagtgcctggaacagagctgaa
cagaaacggctgaaagaggagttgaccagtgctgttgccaagttggaagaaagcaaacac
aaactggcagcactgaaagcacagggagacaataagcatgggactccggtccttgttcct
aaactgggaaacaaagatgtgtccgcagagaaggtgagagataaacaaagagaactgcaa
gatcttgaagctacccacaaggagttaatggaattaatttcaaagcgtctggaggaaatt
aggagactgcacatggagaggattgaaattttgaacaagttagcgacttttcaggatata
ctgacaggtttcagaaacatccgttcttccaaagcttttgaacttgttaatgaccaactt
cagaagtcacaagcagaattggatgatcaccaaacattgttaaagaaattacaggttgat
acggatagctttgtttggcaagaaagacaatttaatcaaaaagttgatctggctgaaatc
cctcagaaggtttctgcatactgtgtgtctagaattgctgaccttgaaaaggatgttctg
aaactatgtaatgaaaagaatatgctggtgctgaaacttgaagaggcttcaagagaacct
ggtcggaaccaagttatctcagaatttaaagctctggtgtcatcactaccaagggaaatg
ggtgccgtgcaaagtgaactgtccaaacacaaggatgcttccttacagttgcattctttg
cgagcagaagtttcttcactttctagcatcctaaccaggaaggaacaagaaattgaacaa
acatcatgcagatctgcccatgctggatctgatataagccaacttcaatctctggtcctt
gatctgaaggaaaacataaaggagcttaagctgtttgtggaattgtataagcatgagtcc
actgattccagacagctgatagaatacagagatagggaactctctgaatgggctcgagtc
cacgtactcaaatattctcttaatgaaagtaaattagagcagcgtgtaattgcagccaat
gaagccgaagcaatgtctcagcagagactagcaacttctgaagctaagattgctgaatta
gggcagaagctggaaacttctaggagagatctagtgagactatctcatatactgaagtct
aaatatgaagaatgcgaagcatatgtggtggagattgagagcataggcaatgcatatgag
gacataatgtcacaaaatcaacaattgctacagcagattattgaaagagatgatcataat
accaagcttttcatggagggtgttaaagcaaaacagtcccatgatgctttgcatttggaa
gtgagctccttgaaacgaaatttgcagcatgcaagcatgttgatggatctgtacaacaag
aaaattgtccgcctagaagaccagctaaggggttggtcagagcgggtgaggagactgtca
gaggatggaatgcagcaatctatatcattgggaaattctcaaagaaagctggctggtttg
catggagaagctccaaagctcatgcagtcaatggatgaactacaagcaaaggttgggagc
aatcgactggaagttgctgagctgcttacagaactagagaaggagaggttcagtaagaag
agaatagaggatgacttggatctaatgtcaagtaaagccaattctctaagagagaagaaa
gataattcagcagtcctgcaaaagcttcatcatgaagtcaaggaatataggggaatatta
aaatgcggtgtctgtcatgaaaggcagaaagagattgtgattgccaagtgctaccatctc
ttctgcaatcagtgtatacagaagtcacttggcagccgtcagaagcggtgtccatcctgt
ggacttagctttggtgttaacgacgtgaaacctatctatatatga
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