Setaria viridis (green foxtail): 117838627
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Entry
117838627 CDS
T07951
Name
(RefSeq) ABC transporter B family member 25, mitochondrial
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117838627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117838627
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
117838627
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
Zeta_toxin
AAA_15
AAA_18
AAA_16
AAA_21
DUF87
MMR_HSR1
FtsK_SpoIIIE
AAA_24
AAA_23
APS_kinase
Motif
Other DBs
NCBI-GeneID:
117838627
NCBI-ProteinID:
XP_034574615
LinkDB
All DBs
Position
9:complement(44900177..44909362)
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AA seq
736 aa
AA seq
DB search
MRPSSRILAAGNLLRGSRFNPQTAAPAAAGFRRLNGANRPGVPKPLFSPFLGGFGPNCGV
PPGNGGPFGRLGSFLPDSTYPPHGARLTRDTRVHAFSTSANAVTAGKPVDKVPKDASKKD
VDEQIADSQILKNLGKYLLLNDSPDFRFRLVLSLGLLVGAKVINVQVPFLFKLAIDWLAA
LGGAEASLASFTETNATLLALFASPAAVLIGYGIARSGVSACTELRNALFSKVTLRAIRS
VSRMVFSHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSI
LAYKFGSTFAWITSVSVATYIAFTLAVTQWRTKFRTAMNKADNASSTVAVDSLLNYETVK
YFNNEQFEVAKYDKYLRNYEDAALKTQSSLAYLNFGQNVIFSSALSTAMVLSSYGVMSGA
LTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQLLEEKPGIKDEPHAQPLQ
FKGGCIEFENVHFGYVPERKILDGATFTVPAGQSIAIVGTSGSGKSTILRLLFRFFDSTS
GSIRIDGQDIRGVTLESLRKHLGVVPQDTVLFNDTIKHNIQYGRLSAKDEEVYDAARRAA
IHDTIMNFPDKYDTVVGERGLKLSGGEKQRVSIARVFLKEPSILLCDEATSALDSTTEAS
ILNSLKSLSVDRTSIFIAHRLTTAMQCDQIIVLENGKVVEQGPHDVLLSKGGRYAELWFQ
QNNSDAVDPAAVTLQV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcggccttcgtcccgcatactagcggcggggaacctcctccgcggctcccggtttaac
ccccagaccgccgcccctgccgccgccggattccggcggctgaacggagccaacaggccg
ggcgtgccgaaacctctcttcagccctttcctcggaggattcggacctaactgtggtgtc
ccgcccgggaatgggggtcccttcggccgcctcggcagcttcctgccggactctacctac
ccgccgcacggcgcgcggcttacccgagacacgagagtacatgcattctccacatctgcc
aatgctgtgacagctgggaagccggttgacaaggtcccgaaagatgcttcaaaaaaggat
gtcgatgagcagatagcagattctcagatactgaaaaaccttgggaagtacttattgttg
aatgacagccctgacttccgcttcaggcttgtgttgtcattaggcctattagttggtgca
aaggttataaatgttcaagtgcctttcttgtttaagctcgctatcgattggcttgcagcc
cttggtggtgctgaagcctcactggcatcgttcacggaaactaacgccaccctattggct
ctctttgcaagcccagcagctgtgttgattggttatggaattgcacgatcaggagtgtcg
gcctgtacagaactgcgaaatgctttattttctaaagtgaccttgagagccatccgttca
gtatccagaatggtattttctcacttgcatgagcttgatcttcgttatcatctaagccgg
caaactggtgctctaaatcgcataattgatcgaggcagccgtgcaataaattacattctc
acagtgatggtgttcaatgttgtgcccacaatactagagattggtatggtgtcaagcata
cttgcttacaagtttggttccacttttgcttggattacttcagtttcagttgctacctat
atagctttcactttggctgtcacacagtggcggactaagttcaggacagccatgaataaa
gctgataatgcttccagtacagtggcagttgactctcttctgaattatgagactgtgaag
tacttcaacaacgaacaatttgaagttgcgaagtacgacaaatatttaaggaattatgag
gatgctgcattgaagacccaaagtagccttgcctacctgaactttggtcaaaatgttatc
tttagctcggctttatctacagcaatggttttgagctcatatggagtaatgagtggtgct
cttactgtgggtgatttggtcatggttaatggacttctattccagctttcattgcctcta
aacttccttgggagtgtgtatcgagaatctagacaaagcctcattgacatgaagtctatg
tttcagttgctggaggaaaaacctggaataaaggatgagcctcatgcacaacctttgcag
ttcaagggaggatgcattgaattcgagaatgttcattttgggtatgtaccagaaaggaag
attcttgatggtgccaccttcactgtacctgcaggacagagcattgccattgtcggaact
agtggcagtgggaaatcaactattcttaggcttctgttcagattttttgattcaacttca
ggatctatacgaattgatgggcaagatatccgaggagtgacactagagagccttcgaaaa
catcttggtgttgtacctcaggacacggtactttttaacgacacgattaagcataatata
cagtatggacgtttatcagcaaaagatgaggaggtctatgatgctgcccgacgtgctgct
attcatgatacaattatgaacttcccagacaagtatgacacagtagtaggagaacgagga
ttgaagctaagtggtggggagaaacaacgagtgtcgatagctcgcgtattcttgaaggag
ccctccattctgttatgtgatgaagcaacaagtgctcttgatagcactactgaagcctca
attttgaattctctgaagtcgttatctgttgaccgaacatcaatctttattgctcatcga
ctcacaactgcaatgcagtgtgatcagataattgttttggagaatgggaaggtagtagaa
caaggaccacatgacgttcttctttcaaagggtgggcgttacgcagaattgtggttccaa
cagaacaacagtgatgctgttgaccctgcagcagttaccctgcaggtttga
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