Setaria viridis (green foxtail): 117838651
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Entry
117838651 CDS
T07951
Name
(RefSeq) putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
svs04136
Autophagy - other
svs04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117838651
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117838651
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117838651
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117838651
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117838651
04131 Membrane trafficking [BR:
svs04131
]
117838651
03036 Chromosome and associated proteins [BR:
svs03036
]
117838651
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117838651
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117838651
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
117838651
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117838651
Membrane trafficking [BR:
svs04131
]
Autophagy
Other autophagy associated proteins
Others
117838651
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117838651
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117838651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
117838651
NCBI-ProteinID:
XP_034574655
LinkDB
All DBs
Position
9:complement(20569558..20575986)
Genome browser
AA seq
315 aa
AA seq
DB search
MEDSAGSRGGGGCGGLDAQIEQLMECRPLPETEVRALCEKAKEILMDESNVQPVKSPVTI
CGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTIL
RGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSI
ENLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNL
KLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPR
RGEPDVTRRTPDYFL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgcgggttcgcgtggcggcgggggatgcggcggcctggacgcgcagatc
gagcagctcatggagtgccgcccgctcccggagacggaggttagagcattgtgtgagaag
gccaaggagatattgatggatgaaagcaatgttcagccagttaaaagcccggtgacaatt
tgtggcgacattcatggacaattccatgaccttgtagaacttttccggattggtggaaag
tgtccagacacgaactatttatttatgggagattatgtggatcgtggttattactctgtt
gagactgtaacgcttttggttgcacttaaggtgcggtacccacaacgacttactattctt
cgtggaaaccatgagagtagacagatcacacaggtgtatggcttctatgatgaatgccta
cgaaaatatggcagtgcaaatgtctggaagatcttcactgatctttttgactattttcca
ttgacagcattggtggaatcagaaattttctgcctccatggtggtttatctccttccatt
gaaaatctcgatagtgttcgtagcttagatcgtgttcaagaggtccctcatgagggacct
atgtgtgaccttctatggtctgatccagatgatcgatgtggctggggcatttctcctcga
ggagctggatacacttttggccaagacatatcggaacagtttaatcacaccaacaatctt
aaacttgttgcccgggctcatcagttggttatggagggttataactgggcacatgaacaa
aaggtggtgaccatattcagtgcacctaattactgttaccggtgtggcaacatggcatcc
atccttgaggttgatgactgcaggaaccacacatttattcagtttgagccagctccgagg
agaggtgaaccagatgtgacacggagaacaccagattatttcctttga
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integrated database retrieval system
