Setaria viridis (green foxtail): 117838660
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Entry
117838660 CDS
T07951
Name
(RefSeq) F-box protein At3g58530
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117838660
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117838660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
STAS
bPH_9
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
117838660
NCBI-ProteinID:
XP_034574670
LinkDB
All DBs
Position
1:11140140..11143845
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AA seq
349 aa
AA seq
DB search
MAAPAADEAWCRETVPRVLELVSPRLPQRDVCALLAVSPWCYRTLVSNPRLWEVLDMREM
KNAGDRLISALSLARYRHLKLLNLEFAQDIEDRHFVHLKEMSGISLENLEFLNLNACQKI
SDKGIEAITSLCPNLHGLSIYWIVGLTDSSIGHITKYCRQIVDLNLSGCKNISDKGMRLI
ANSYQGLKKLNITRCVKLTDDGLKEVLQKCSLLESLNLYALSSFTDKIYKDIGLLSNLTF
LDLCGAQNLTDDGLVYISRCGGLTYLNLTWCVRVTDAGVVAIAQGCRSLKLLSLFGIVGV
TDACLEALSKSCSHSLTTLDVNGCIGIKRRSRDDLLKLFPLLSCFKVHS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcggcggacgaggcgtggtgccgggagacggtgccgcgggtgttggag
ctggtgagcccgcgcctcccgcagcgtgacgtctgcgcgctgctcgccgtcagcccctgg
tgctaccgcaccctcgtcagcaaccccaggctctgggaggtacttgatatgcgtgagatg
aagaacgccggcgaccgacttatttcagcactttctctggcaaggtatcgccatctcaaa
ctactgaaccttgaatttgcacaagatatcgaggaccggcattttgttcatctaaaagaa
atgagtggtatctcactggaaaatttagaattcctgaacctgaacgcatgtcagaaaatc
tctgacaaaggaattgaagccattaccagtctttgtcctaaccttcacggcctttcaatc
tattggattgtgggactgacagactcaagcattgggcacattacaaagtactgcaggcag
atagtggacctcaacttgagtggttgtaagaatatctcagataaaggaatgcggttaatt
gctaatagttaccaaggactaaagaaattgaacataaccaggtgtgttaagttgacagat
gatgggcttaaagaagtgcttcagaaatgttctttgcttgaaagcttaaacctttatgcc
ctttcgagttttactgacaagatttataaggacataggattgttaagtaatcttacattt
ctagacctatgtggtgctcagaatctaactgatgatggtctagtatacatatcaagatgc
ggaggtctaacatacctcaatttgacttggtgtgtacgtgttactgatgctggtgttgta
gctattgcgcaagggtgccggtccctcaaactgctaagtttgtttggaatagttggggta
actgatgcctgcctggaggctttatcaaaatcttgctcgcacagcctcacaacacttgat
gtaaatggctgcatcggtatcaagaggaggagccgggatgacctgcttaagttgttccca
ttgctgagttgcttcaaagtgcacagctag
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