Setaria viridis (green foxtail): 117838671
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Entry
117838671 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117838671
Membrane trafficking [BR:
svs04131
]
Protein recycling
Others
EARP complex
117838671
Endosome - Golgi transport
Tethering complex
GARP complex
117838671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SBDS_N
RepB_C
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
117838671
NCBI-ProteinID:
XP_034574686
LinkDB
All DBs
Position
9:complement(15373346..15386328)
Genome browser
AA seq
689 aa
AA seq
DB search
MAGAHEQRIEERFGRFFCFDEDSESEDISLDELEEELEEHKDYDVLITILTNGEKQRGMA
TLVEGNLGHIEEALIQDYIEDNDSLALLHDQIHECDIILSQIGSILSGFQVHIGSISSEI
RSLQVKSLDISVKLKNRKLVETKLAGFVEEIIAPPGLVDILVNGEVNDGYAKSLEILSKK
LKFVQVNPLINASKALKDIKQELERLRQKALSKVSSHIIEIFFAMRKPGTNIQILQQNLL
QKHRYLVLFLKEHGSRTYGDLCASYVDTMNKVLSTYFRVYVEALERLKLDIGASSDLTGY
TSIIDIITRGREHLRDHRFIFSLGERANILKEIDQPGLVPHIPQVNSRKYPYEVIFRSLQ
KLLMDTASSEYLFIEAFFGEESLFYQVFEGPFAVIDQHLDLTLPNCHDAICLMLMICITR
KHQLVMSNRRLPCLENYFDKAIMYLWPRFKVVFDMYLQSLHQCNAKTLWIDGTHPHHIVR
CYVEFTASLVQLNAECGDGQLDMNLECLWSAIDGLLVRLAQNFTTPKLQHLFVLNNYDMA
ISVLKEAGDEAKNLQRYFEEKLESNMMAFVDDLLMEHFRDLLQFVRSRVSEDLVFYTEHS
NIAELEPVVKNFAMKWRSSLEVMHNEVVTSCSNLLSGMAILKAAMAQLLNDYNRLSECVK
KIPGGSALNRYLVSITSISYEIRKYSRAL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcccatgagcaacggatcgaagaacgtttcggtcgttttttctgcttcgat
gaggattctgaaagtgaggatatatcgctggatgagttggaggaggaactcgaagagcac
aaggactatgatgtactaataactattttaacgaatggtgaaaaacagcgtggtatggcg
acattggttgagggcaacctaggccatatcgaagaagctctgattcaagactatattgaa
gacaacgacagccttgctctgttgcacgatcagattcatgaatgtgacattattttgtca
cagataggatcaattcttagtgggttccaggtccatataggttcaataagctcggaaatt
agaagcctccaggtgaaatccttggatataagtgtgaaactgaagaaccgcaagttggtt
gagacaaagcttgctggatttgttgaagagataattgctcctcctggtttggtagatatt
ctggttaatggagaggtaaatgatggttatgccaaaagtctggagattttgagcaaaaag
ttgaaatttgttcaagtcaatccactgattaatgcatcaaaagctttgaaagatattaag
caagaactggaaaggcttcgacaaaaggcactatccaaggtttccagtcatattatcgag
attttctttgctatgagaaagcctggaactaatatacagatattgcaacaaaatttgctt
cagaaacataggtatctcgttctgtttcttaaagagcatggttcccgcacatatggtgat
ttgtgtgcatcgtatgtcgatacaatgaataaggtactgagtacatactttcgggtgtat
gtagaagcactggagaggctgaagctagatattggtgcatccagtgatttaactggatat
accagtataattgatattataacaaggggaagggagcatttgagagatcaccgttttatc
ttttcattaggtgaacgtgcaaatattttgaaggagattgatcaacctggcttggttcct
catatacctcaagtcaactctcgtaaatacccatatgaagttattttccggagccttcag
aagcttctgatggacactgctagctctgagtatcttttcattgaagcattctttggagaa
gagtcactgttttatcaagtttttgaaggaccttttgctgttattgatcaacatttggat
cttactcttccaaattgccatgatgctatatgcctgatgctcatgatctgcataactagg
aagcaccagttggttatgtccaacagacggcttccttgtcttgagaactactttgataag
gctatcatgtatctttggccacgtttcaaggtagtgtttgacatgtaccttcaaagctta
catcagtgcaatgcaaaaaccttatggatagatggtacccatccgcaccatattgtaagg
tgctacgtggagttcacagcatcccttgttcaacttaatgccgaatgtggagacggtcag
cttgatatgaacttggaatgcttgtggtcagctattgatggcctacttgttaggcttgcc
caaaattttacaactcccaagctacagcacctttttgttttgaataattatgacatggct
atctctgtcctaaaggaagctggtgatgaagccaaaaatcttcaaagatattttgaagag
aagctagaaagtaatatgatggcttttgtggatgatttgctcatggaacatttcagagat
ttacttcaatttgtgaggagtcgtgtttctgaagacctggtattttacactgagcactca
aatattgctgaacttgagccagttgtgaagaactttgccatgaaatggagaagttctcta
gaggtcatgcacaatgaagttgtaacttcttgcagtaaccttttgtctgggatggcgatt
ctaaaagcagcaatggctcagttgcttaatgactataacaggctctcagaatgtgtgaaa
aaaatcccagggggctcagctttgaacagatatctggtttccatcacctcaatttcatat
gaaatcaggaaatactcaagagcactctag
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