Setaria viridis (green foxtail): 117838718
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Entry
117838718 CDS
T07951
Name
(RefSeq) 3beta-hydroxysteroid- dehydrogenase/decarboxylase
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00100
Steroid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117838718
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
117838718
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Motif
Pfam:
3Beta_HSD
Epimerase
Reticulon
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
Polysacc_synt_2
NmrA
DUF7819
Motif
Other DBs
NCBI-GeneID:
117838718
NCBI-ProteinID:
XP_034574741
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Position
9:complement(41325153..41330517)
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AA seq
559 aa
AA seq
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MEAAAAGGGGGRWCVVTGGRGFAARHLVTMLLRSGEWRVRVADLAPAITLDRDEEEGFLG
AAFREGQAAYASADLRDKAQVARAFEGAEVVFHMAAPDSSINSFQLHYSVNVEGTKNVID
ACIRCKVKRLIYTSSPSVVFDGVHGIFNADESMPYPDKFNDSYSETKADAEKLVMRANGR
EGLLTCCIRPSSIFGPGDKLLVPSLVAAARAGKSKYIIGDGNNYYDFTYVENVAYGHVCA
EKTLSSEDGAKIAAGKTYFITNMEPIKFWEFMSLILEGLGYERPSVKIPVSVMMPVAHVV
EWTYKKFAKYGMKVPQLTPSRIRLLSCNRTFSCSRAKDQLGYEPLVSLKDGLKRTVESYP
HLQAQNQRSISKASIFLGNGNLAKTVLWEDTKQTVTVLLLLAVIYYHLFTCGYTFITAMA
KLLSLTALFLFIHGMLPTNVFGHKIEKLEASNFHITQVEAHHVAHSISSSWNSLVTALRS
LCRGNDWPLFFKVALSLLVVSILSSMSSQAAFKIGTALVFTGFKAYEKWEDTIDSMAGDA
CSILLHFGSTKKSSSQKQM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggcgggcggaggcggcgggaggtggtgcgtggtgactggtggccgc
gggttcgcggccaggcacctggtgacgatgctcctccgctccggcgagtggcgggtgcgc
gtggccgacctggcccccgccatcacgctcgaccgcgacgaagaggaagggttcctgggc
gccgcgttccgcgagggccaggccgcctacgcctccgcggacctccgcgacaaggcccag
gtcgccagagcttttgaaggggccgaagtagttttccatatggctgctccagattcatcc
atcaacagcttccagcttcattattcagtcaacgtcgagggaacaaagaatgttattgat
gcttgtatccgttgcaaagtgaagagactaatctacactagttcaccaagtgtcgtattt
gatggagttcatggaatttttaatgcagatgaatcaatgccttacccagataagtttaat
gattcatattcagaaacgaaggcagatgcagaaaaactggtgatgagggctaatggtagg
gaagggcttcttacttgctgtatacgccccagtagcatttttggccctggtgataagcta
ctggttccatctttggttgctgctgcaagggcagggaagtccaaatacattattggtgat
gggaacaattactatgatttcacctatgtggaaaatgtggcatatggccatgtttgtgca
gagaaaactctgtcatctgaagatggtgccaagatagctgctggaaaaacctattttatt
acaaacatggagcctatcaaattctgggagtttatgtcattgattttggaaggtcttgga
tatgaaaggccttcagtaaaaatacctgtctctgttatgatgccagtggctcatgttgta
gaatggacttacaagaaatttgccaagtatggaatgaaagttccacagctgaccccttca
aggatcaggctgctctcatgtaacaggacattcagctgctcaagagcaaaggaccagctt
ggttatgaaccccttgtgtcccttaaggatggactgaagagaacagtagaatcatacccc
catctacaagctcagaatcagaggagcatatcgaaggcctcaattttccttgggaatgga
aatctagcaaaaacagtactttgggaagatacgaagcaaacggtgacagtgctactacta
ttggctgttatctactaccacttatttacatgtggttacaccttcatcacagctatggca
aagcttttgtcactgactgcactcttcttattcattcatggcatgctaccaactaatgtg
tttggccacaagattgagaaacttgaggcctcaaattttcacatcacgcaggtggaagcc
catcatgtagcccattccatcagctcgtcatggaactctttagtcactgcgctaagatct
ctttgcagaggaaatgactggccactgtttttcaaggttgcattatctctactagttgtc
agcatccttagttccatgtcgtcgcaggctgcattcaaaataggtactgctctggttttc
acaggcttcaaagcatatgagaaatgggaggacaccatcgacagcatggcgggcgacgct
tgctctattcttctgcactttggttctaccaagaaatcttctagccagaaacaaatgtag
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