KEGG   Setaria viridis (green foxtail): 117838751
Entry
117838751         CDS       T07951                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117838751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117838751
   03041 Spliceosome [BR:svs03041]
    117838751
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117838751
Spliceosome [BR:svs03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117838751
SSDB
Motif
Pfam: THOC7 YwqH-like
Other DBs
NCBI-GeneID: 117838751
NCBI-ProteinID: XP_034574792
LinkDB
Position
9:55333597..55336312
AA seq 241 aa
MLAKGRKVAGRGEEMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
IEKDADNTSDCERLYKAFLQEINTFELPLLKSKAVVDANIREKESFNELQIEIERQILQA
QTDIEDLRKQLEQSKIERQHKEECEAIRKLISLQPPRSETERLIADLEKEIADLEAENVA
CLRTLELRKKQFALLLHVVEELQISIEDEQKSIADELRAIAEEQKMSIEESGGASDAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcttgccaaagggaggaaggttgctggaaggggtgaagaaatgtctgcgcattatgca
tttggaccacaggaggacgatgcgatcattaagcacaggcttctgactaggacgactact
accaggggtgaaccaccactaaagaagcttcagaagaagttcatgtcctttgccacggag
attgagaaggatgcagataacacaagtgactgcgagagactgtacaaggccttcctacag
gaaattaacacctttgaactgcctcttctgaaaagcaaggctgttgttgatgcaaacatt
agggagaaggagagctttaatgagctgcagattgagattgagcgacagatcttgcaagct
cagactgatattgaggatcttaggaagcaacttgagcagagcaagatcgagaggcagcac
aaagaggaatgtgaagcaatcaggaagctgatttctttgcagcctccacggtcagaaact
gagagactcattgcagaccttgagaaggaaatagctgatttggaggctgagaacgtagca
tgcttaaggactttggaactacggaagaagcaatttgcccttcttctacatgtggttgag
gaattgcagatctcgattgaagatgagcaaaagagtatagcagatgagctgagagctatc
gctgaagagcagaagatgagcatagaagaaagcggcggtgcttcagatgccatggctgta
gactga

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