KEGG   Setaria viridis (green foxtail): 117838801
Entry
117838801         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117838801
  09124 Replication and repair
   03420 Nucleotide excision repair
    117838801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117838801
   03400 DNA repair and recombination proteins [BR:svs03400]
    117838801
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117838801
  RNA polymerase III system
   RNA polymerase III
     117838801
  RNA polymerase I system
   RNA polymerase I
     117838801
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117838801
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM
Other DBs
NCBI-GeneID: 117838801
NCBI-ProteinID: XP_034574862
LinkDB
Position
9:12067003..12069823
AA seq 143 aa
MADDDYNEMDMGYEDEPPEPEIEEGAEEELENNNEDTPDDVVGAEGEEKEQEKAKSERKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggacgacgattacaacgaaatggacatggggtacgaggatgagcccccagaacct
gagattgaggaaggggctgaggaagagcttgaaaacaacaatgaggacacccctgatgat
gttgtaggtgccgagggtgaagaaaaggaacaggaaaaggccaagagtgagcgcaaaacg
tcaaaatatatgacaaagtatgagcgtgcacgcatcttgggtacacgggctttgcagata
agcatgaatgctccagtcatggttgagctcgagggagaaactgatcctcttgagattgca
atgaaggagctgagagcgcgcaagatccccttcacaatcaggaggtacttacctgatgga
agctatgaggactggggagttgatgagctcatcgtggaggattcgtggaaacgccaggtt
ggtggggactga

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