Setaria viridis (green foxtail): 117838807
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Entry
117838807 CDS
T07951
Name
(RefSeq) zinc finger CCCH domain-containing protein 25
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117838807
Spliceosome [BR:
svs03041
]
Complex B
Other components
RES complex
117838807
Complex C
117838807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
RRM_7
zf-CCCH_10
RRM_5
DIKK1-2-4_C-subdom2
zf-CCCH_9
DUF1866
Motif
Other DBs
NCBI-GeneID:
117838807
NCBI-ProteinID:
XP_034574867
LinkDB
All DBs
Position
9:complement(1499343..1502067)
Genome browser
AA seq
304 aa
AA seq
DB search
MNPLTQVKRTQVINQKEALLGIGEDASWHAKFKDSAYVFVGGIPFDLTEGDLLAIFAQYG
EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIRVDHVSKYKKKEE
EDEEERQQKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGAPWEHDKHH
DVPKSRGICYAFQKGECNRGASCKFSHDEQKNANTRWSSRDGESSRSERYEDRDSRSRRD
DRRAEDRDRYRHDRSPERSRGERQRNDDRYSQGREERSERRKYDDMDRKRSRYDDNSERR
ERRG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccctgactcaggtgaagcggacgcaggtgatcaaccagaaggaggcgctcctt
ggcatcggcgaggacgcgtcgtggcacgccaagttcaaggactccgcctacgtcttcgtc
ggcggcattcccttcgacctcaccgagggcgacctcctcgccatcttcgcgcagtacggt
gaggtggtcgacgtgaacctcgtgcgcgacaagggcacgggaaaatccaagggcttcgcg
ttcctcgcgtacgaggaccagaggagcacgattctcgctgtagacaatttgaatggagct
aaagttcttgggaggatcataagggttgaccatgtaagcaagtacaagaagaaggaggag
gaagatgaggaggagcgacagcagaagagggaggctcgtggagtctgctatgctttccag
aaaggcgagtgcaaccgcggagcttcctgcagatattcgcatgatgagcagagaaatgcg
aacactggttggggttctaaagaggatagcggtgcaccatgggagcatgacaaacaccat
gatgtaccaaagagccgtggaatatgctatgctttccagaaaggcgagtgcaaccgtgga
gcatcctgcaaattttcccatgatgagcagaaaaatgcaaacactcgttggagttctagg
gatggtgaatcatcaagatcagagcgatatgaagaccgagattctaggagtaggcgtgat
gatagaagagcagaagatagggacagatacaggcatgacaggtcacctgagagatcaaga
ggtgagaggcagaggaatgatgacagatattctcaaggaagggaagagagatcagaaaga
cgtaaatatgatgacatggatcgcaagcgttcacggtacgacgacaatagtgaacgccgt
gaaagaagagggtga
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