KEGG   Setaria viridis (green foxtail): 117838821
Entry
117838821         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K15691  E3 ubiquitin-protein ligase RFWD3 [EC:2.3.2.27]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117838821
Enzymes [BR:svs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117838821
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117838821
SSDB
Motif
Pfam: WD40_RFWD3 zf-RING_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-C3HC4_4 Rtf2 zf-C3HC4_3 zf-RING_5 zf-UDP zf-RING_Vps41 zf-Nse zf-RING_4 zf-ANAPC11 Cep57_CLD_2 zf-RING_16 zf_RING_Vps8 Beta-prop_WDR3_2nd FYVE DUF3090 Beta-prop_SPT8 zf-TFIIIC Nop14 WDR55 RINGv PknG_rubred zf-RING_11
Other DBs
NCBI-GeneID: 117838821
NCBI-ProteinID: XP_034574886
LinkDB
Position
9:complement(56029277..56034744)
AA seq 592 aa
MPSRSRARGRTLQPVVLVDQLEGVFDVDYGEADLEGGEGEEESDDDGGSEDEDGEGSSDD
DDEEEDDEEEEEEQEREQFVEGGPSARARVSAVAAADAAAERATTPTCPVCMEPWTSQGP
HRISCIPCGHVYGRSCLERWLTQRGNRSATCPQCSKRFKQKDIINLYAPEVTAPKNELEK
EISYLRERNDSLENKVLHHDKLFEEMTKRQIVLEQGIIDAVSLKRQKVAEHSDRAVHLEP
STSATVSFCSQYELFLDGARVIGIDASNQIILASGRAAAVGAEHVITKISMGSAHEPFKV
HLPPNTKAIRDMCILPGGSAIFTSVGRKLSLFSMTTDSVVLQCDLPVPGWSCSADVSSSR
HIYAGLQNGMLMVFDVRQTTRPLHSIVGLSTNPIHTLHSVIDNNGCRKILSASAVGPCMW
DADGNQSRPHLLTEMDSQRICISLACAPPSSDVLVASFRPKVEASEDATASQVYLSQTPT
RPVGSGKLGHHALVRRTGNASFTEGPTCYANVSEVRMSKSAIIPYGDNQHLFAYGDESLH
GVRTWQLPSFAIHADLCAHRQPILDLRYAESSGGGRYLGCLSEEKLEVFKIS
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgccgtcacgctcccgtgccagggggcggacgctgcagccggttgtgctggtcgatcaa
ttagagggtgtcttcgacgtcgactacggcgaagcggacctggaggggggcgagggcgag
gaggagtccgatgatgacggaggctcggaggatgaggacggtgaaggatccagcgacgac
gacgatgaggaggaggatgatgaggaggaagaggaggagcaggagagggaacagtttgtc
gagggagggccatccgcccgagctagggtttccgcggtggcggctgccgacgccgcggcg
gagagggcgaccacgcccacctgccccgtctgtatggagccatggacttcccagggcccg
catcggatcagctgtatcccgtgcgggcatgtctacgggagatcttgcttagagaggtgg
ttgacccagcgtgggaatcgaagtgcaacgtgccctcagtgtagcaaaaggtttaaacag
aaggacatcatcaatctctatgcaccagaggtcaccgctccaaaaaatgaacttgaaaag
gaaatttcgtatttgagggagagaaatgattccctggagaataaggttttgcaccatgat
aaattgtttgaggagatgaccaagaggcagattgttctggaacagggaataatagatgct
gttagcttaaagagacagaaagtggcagagcattcagatagagctgtacatctggagcca
tctacctcggccactgtaagcttttgctcacagtatgaattatttttggatggagctcga
gtcatcggcatagatgcatctaaccaaataatacttgcttctgggagggcagctgctgta
ggtgctgaacatgttattaccaagattagcatgggttctgctcatgaaccgttcaaagtc
caccttcctcccaataccaaagctattagggatatgtgtatccttcctggtggctctgct
atttttacatcagtaggaaggaagttatcacttttcagcatgacaacagacagtgtcgtc
cttcagtgtgatttgccggtccctggttggtcatgttcagcagatgtatctagttcacgt
catatttatgctggcttgcagaacggcatgcttatggtctttgatgtccgtcaaactaca
agacccttgcattctatagtggggctttctacgaatccgattcatacgctccactctgtc
attgataataatggttgcaggaagattctttcagcttccgctgtaggtccctgcatgtgg
gatgctgacggcaatcaaagcaggccgcatttgctcactgagatggacagtcagcgtata
tgcatttcccttgcatgtgcccctccatcaagcgatgttttggtggcttccttccggccc
aaagttgaggcatcagaagatgctactgcatctcaggtgtatctatcacagacgccaaca
cgccccgttggttcaggaaaattggggcatcatgcccttgtcaggaggacaggtaatgca
tccttcaccgaaggcccaacatgctatgccaacgtaagtgaagtacgcatgtcaaaatca
gcaatcataccttatggagacaatcaacatctcttcgcctacggggatgagtcgctgcat
ggggtccggacgtggcaactaccttcgtttgcgattcatgccgatctttgcgcccaccgg
cagccaatccttgatttaaggtatgcggaaagctcaggtggagggaggtaccttggatgc
ttaagcgaggaaaagttggaggtcttcaaaattagttag

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