Setaria viridis (green foxtail): 117838821
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Entry
117838821 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117838821
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117838821
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117838821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_4
Rtf2
zf-C3HC4_3
zf-RING_5
zf-UDP
zf-RING_Vps41
zf-Nse
zf-RING_4
zf-ANAPC11
Cep57_CLD_2
zf-RING_16
zf_RING_Vps8
Beta-prop_WDR3_2nd
FYVE
DUF3090
Beta-prop_SPT8
zf-TFIIIC
Nop14
WDR55
RINGv
PknG_rubred
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117838821
NCBI-ProteinID:
XP_034574886
LinkDB
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Position
9:complement(56029277..56034744)
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AA seq
592 aa
AA seq
DB search
MPSRSRARGRTLQPVVLVDQLEGVFDVDYGEADLEGGEGEEESDDDGGSEDEDGEGSSDD
DDEEEDDEEEEEEQEREQFVEGGPSARARVSAVAAADAAAERATTPTCPVCMEPWTSQGP
HRISCIPCGHVYGRSCLERWLTQRGNRSATCPQCSKRFKQKDIINLYAPEVTAPKNELEK
EISYLRERNDSLENKVLHHDKLFEEMTKRQIVLEQGIIDAVSLKRQKVAEHSDRAVHLEP
STSATVSFCSQYELFLDGARVIGIDASNQIILASGRAAAVGAEHVITKISMGSAHEPFKV
HLPPNTKAIRDMCILPGGSAIFTSVGRKLSLFSMTTDSVVLQCDLPVPGWSCSADVSSSR
HIYAGLQNGMLMVFDVRQTTRPLHSIVGLSTNPIHTLHSVIDNNGCRKILSASAVGPCMW
DADGNQSRPHLLTEMDSQRICISLACAPPSSDVLVASFRPKVEASEDATASQVYLSQTPT
RPVGSGKLGHHALVRRTGNASFTEGPTCYANVSEVRMSKSAIIPYGDNQHLFAYGDESLH
GVRTWQLPSFAIHADLCAHRQPILDLRYAESSGGGRYLGCLSEEKLEVFKIS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcacgctcccgtgccagggggcggacgctgcagccggttgtgctggtcgatcaa
ttagagggtgtcttcgacgtcgactacggcgaagcggacctggaggggggcgagggcgag
gaggagtccgatgatgacggaggctcggaggatgaggacggtgaaggatccagcgacgac
gacgatgaggaggaggatgatgaggaggaagaggaggagcaggagagggaacagtttgtc
gagggagggccatccgcccgagctagggtttccgcggtggcggctgccgacgccgcggcg
gagagggcgaccacgcccacctgccccgtctgtatggagccatggacttcccagggcccg
catcggatcagctgtatcccgtgcgggcatgtctacgggagatcttgcttagagaggtgg
ttgacccagcgtgggaatcgaagtgcaacgtgccctcagtgtagcaaaaggtttaaacag
aaggacatcatcaatctctatgcaccagaggtcaccgctccaaaaaatgaacttgaaaag
gaaatttcgtatttgagggagagaaatgattccctggagaataaggttttgcaccatgat
aaattgtttgaggagatgaccaagaggcagattgttctggaacagggaataatagatgct
gttagcttaaagagacagaaagtggcagagcattcagatagagctgtacatctggagcca
tctacctcggccactgtaagcttttgctcacagtatgaattatttttggatggagctcga
gtcatcggcatagatgcatctaaccaaataatacttgcttctgggagggcagctgctgta
ggtgctgaacatgttattaccaagattagcatgggttctgctcatgaaccgttcaaagtc
caccttcctcccaataccaaagctattagggatatgtgtatccttcctggtggctctgct
atttttacatcagtaggaaggaagttatcacttttcagcatgacaacagacagtgtcgtc
cttcagtgtgatttgccggtccctggttggtcatgttcagcagatgtatctagttcacgt
catatttatgctggcttgcagaacggcatgcttatggtctttgatgtccgtcaaactaca
agacccttgcattctatagtggggctttctacgaatccgattcatacgctccactctgtc
attgataataatggttgcaggaagattctttcagcttccgctgtaggtccctgcatgtgg
gatgctgacggcaatcaaagcaggccgcatttgctcactgagatggacagtcagcgtata
tgcatttcccttgcatgtgcccctccatcaagcgatgttttggtggcttccttccggccc
aaagttgaggcatcagaagatgctactgcatctcaggtgtatctatcacagacgccaaca
cgccccgttggttcaggaaaattggggcatcatgcccttgtcaggaggacaggtaatgca
tccttcaccgaaggcccaacatgctatgccaacgtaagtgaagtacgcatgtcaaaatca
gcaatcataccttatggagacaatcaacatctcttcgcctacggggatgagtcgctgcat
ggggtccggacgtggcaactaccttcgtttgcgattcatgccgatctttgcgcccaccgg
cagccaatccttgatttaaggtatgcggaaagctcaggtggagggaggtaccttggatgc
ttaagcgaggaaaagttggaggtcttcaaaattagttag
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