Setaria viridis (green foxtail): 117838842
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Entry
117838842 CDS
T07951
Name
(RefSeq) SEC1 family transport protein SLY1
KO
K19998
sec1 family domain-containing protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117838842
Membrane trafficking [BR:
svs04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117838842
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117838842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
117838842
NCBI-ProteinID:
XP_034574914
LinkDB
All DBs
Position
9:complement(22601560..22604022)
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AA seq
623 aa
AA seq
DB search
MALSLRRKQLDVIVRMLHLNQQQLPNGGEGQGEEEAYKLLVMDPACVSLLSPVLKVGDLR
RHGVTLTLGIDRPRQAVPDAPAVYLVRPTPSNVDRIAADAAAGLYASFHVNFSTSVPRPV
LERLAAACAAAPPACAGRVARVADQYIDFVCLEEGLFSLAQPRAYVALNDPAAADADITS
LVDAVALGLFCVFATLGVVPVIRCARGGPAEMVAAALDARFRDHLLAKPNLFTEAASAAV
ASFQRPVLCLFDRNFELSVGVQHDWSYRPLVHDVLGLKLNKLKLPAEKYELDDSDKFWVT
NSWSPFPKVAEEIEAQLAKYKQDVDEVNQRTGGGSGVEFDGTDLIGNTRHLMNAVNSLPE
LTERKKMIDKHTNIATALLGHIKERSLDGYCDCENDMLVNGTVDRNTLLSLLKGKGTKED
KLRLAVTYLLSFETPPSSELEQVEAALRESEVDMSAFQYVKRIKALNTQFAAASGTATKS
NIVDWAEKLYGQSLSAVTAGVKNLLSDGRQLALTRTVEALMEGKPNPEVDDYLLFDPRAP
RSGTGGQFKGPFREAAVFMIGGGNYIEYRSLMELEQRTQPSKHVIYGATEILSGAEFIHQ
LAELGQKAGLGGGSSNIPPGAAQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagcctccgccgcaagcagctcgatgtgatcgtgcggatgctgcatctgaac
cagcagcagttgccgaacggcggagaggggcagggggaggaagaggcgtacaagctcctg
gtgatggatccggcctgcgtctccctcctctcgccggtgctcaaggtcggcgacctccgc
cgccacggcgtcaccctcaccctcggcatcgatcggccgcggcaggcggtccccgacgcg
ccggccgtctacctcgtccgccccacgccgtccaacgtggaccgcatcgccgccgacgcc
gccgcgggcctctacgcgtcgttccacgtcaacttctccacctccgtcccgcggcccgtc
ctcgagcgcctcgccgccgcctgcgccgccgcgccgcccgcgtgcgcgggccgcgtggcc
cgcgtcgccgaccagtacatcgatttcgtctgcctcgaggaggggctcttctctctggcc
cagccccgtgcctacgtggcactcaacgaccccgccgccgccgacgctgacatcacgtcc
ctcgtcgacgccgtcgcgctgggcctcttctgcgtcttcgccacgctcggtgtggtgccc
gttatcaggtgcgcacgcggagggcctgcggagatggtcgctgctgccctcgatgcccgg
ttccgcgaccacctactcgccaagcccaacctcttcacggaggctgcatcagccgctgtt
gcgtcgttccagcgccctgtgctgtgcctcttcgacaggaattttgagctgtctgtgggg
gtgcagcatgactggagctaccggccattggtccatgatgtgcttggcttgaagcttaac
aagctgaaattgcctgcagagaagtatgaattggatgactctgataaattctgggtcaca
aacagctggtcaccattccccaaagttgctgaggaaattgaggcacagcttgccaagtac
aagcaggatgtggatgaggtgaaccagcgcactggtggtggcagtggagttgagttcgat
ggaactgatttgattggcaacacaaggcatctcatgaatgcggtcaattcgctccctgag
ctgacagaaaggaagaagatgattgataagcacacaaatattgcaacagcattgcttggg
catatcaaggagaggtctctggatggatactgtgactgtgagaatgatatgcttgtgaat
ggcactgtggaccggaacacattgctgagtctccttaaagggaagggcaccaaggaagat
aagcttcggctagctgtgacctacctgctgtcctttgagacaccaccatcatcagaattg
gagcaggttgaagctgcacttcgagaatcagaagtagacatgtcagcgtttcagtacgtg
aagaggataaaggcattaaacactcaatttgctgctgcatcaggcacagcaaccaagagc
aacattgtcgattgggctgagaagctttatgggcagtcccttagcgctgtaactgcaggt
gtgaagaatctcttgtcagatgggaggcaactggccttgacgaggacagttgaagctcta
atggaagggaaaccaaacccagaggtggatgactacctcctttttgacccacgagctcct
aggtcaggaactggtggtcagtttaaaggacccttcagagaagctgctgttttcatgatc
ggtggtggaaattacattgagtacaggagcttgatggagctagaacaacgcacacagcct
tccaagcatgttatatatggtgcaacagaaattcttagtggggcagagtttattcaccaa
cttgcggaattggggcagaaagctggattgggtggtggcagcagcaacataccaccaggt
gcagcgcagtag
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