KEGG   Setaria viridis (green foxtail): 117838950
Entry
117838950         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117838950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117838950
Spliceosome [BR:svs03041]
 Complex C
  Other components
   Step II factors
    117838950
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st eIF2A Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SCAP
Other DBs
NCBI-GeneID: 117838950
NCBI-ProteinID: XP_034575051
LinkDB
Position
9:complement(41743568..41746708)
AA seq 572 aa
MDLLQSSYAPDDASSPEESAAASSPDSSPLRLPSKSAAPAVDDTALALSAAASASRPLDP
SLHLVAFNPTADQLWAPIVGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYASDPSGLHIVGDAQSQAPEPDTVYNLAPSEHKRRRLLAKADNQEEPLPPDARNPAS
EEWILHNKQSPWAGKKEAPPAELTEEQKQYAEAHAAKKAEKEARGEGKGERAEVVVKSTF
HGKEERDYQGRSWITPPKDAKASNDHCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSA
SMDCKIKIWDVLGSRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLK
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggatctcctccagtcctcgtacgcgccggacgacgcctcctcgccagaggagtcggcg
gccgcttcctcgccggactcctccccgctccgcctcccctccaagtccgccgcccccgcc
gtcgacgacaccgcgctcgcgctctccgccgccgcctcggcctcccgcccgctcgacccc
tctctccacctcgtcgccttcaaccccaccgccgaccagctctgggcgccaatcgttggg
cctcagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctgggc
cacgtcgaggacgccgcggtactgcctttcctcttcgacgagcagtacaacaccttccac
aggttcggctacgcatccgacccctccggcctccacatcgtcggcgacgcgcagtcgcag
gcgcccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctc
ctggccaaggcggacaaccaggaggaaccactgcccccggatgccagaaatccggcctcc
gaggagtggatcctccacaacaagcagagcccctgggctggcaagaaggaagcgccgccc
gcggagctcactgaagagcagaagcagtatgccgaggcgcacgcggccaagaaggcagag
aaggaggctcgcggtgaagggaagggcgagagggcagaggtggtggtcaagagcaccttc
cacgggaaggaggagagagactaccaggggaggtcctggatcacaccacccaaggatgcc
aaggccagcaacgaccactgctacatccctaagaggtgtgtgcatgagtgggtcggccac
accaaaggggtttcagccatcagatttttccccaagtatgggcatctcttactgtctgcg
agtatggattgtaagattaagatctgggatgtgctcgggtcgcggacatgtatgcgcaca
tatatgggtcactcaaaggcagtgagggatatttcgttctccaatgatgggaccaaattc
ttgagtgctgggtatgacaggaacatacagtactgggatactgagacagggcaggtgatc
tcgaccttctcaaccgggaaggtcccatatgttgtgaagctgaatcctgatgaggataag
cagcatattctccttgccggaatgagcgacaagaagattgtgcaatgggatatgaaatca
gggcagataacacaagagtacgatcagcatttaggggctgtgaacaccataacatttgtc
gataataacaggaggtttgtgacatcgagtgatgacaagtctcttcgtgtttgggagttt
ggcatccctgtggtgattaagtatatcagtgagccgcacatgcactcaatgccatcaatt
gcgctgcacccaaactctaactggctggcagcacagagcttggacaatcaaatactgata
tacagcaccaaggagaggttccaactcaataagaagaagcgatttgctggccacattgta
gcaggttatgcttgtcaggtgaacttctcacctgatgggagatttgtgatgtcaggtgac
ggtgaaggtagctgctggttctgggattggaaaagctgcaggaggtttaagacattgaag
tgccacaatggggtctgcattggatgtgagtggcatccgttggaaactagcaaggttgca
acatgtggatgggatggtgtaattaaatactgggattga

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