Setaria viridis (green foxtail): 117838955
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Entry
117838955 CDS
T07951
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117838955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117838955
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19-related factors
117838955
Complex C
117838955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
117838955
NCBI-ProteinID:
XP_034575060
LinkDB
All DBs
Position
1:complement(38160166..38162871)
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AA seq
606 aa
AA seq
DB search
MATLKDLLPAPKTTASTFYDHSSDPWFKERYGGEPAQGSAAARPAAATRAIPPYGKRAGF
VPRRPEDFGDGGAFPEIHVAQYPLGMGRRDDKGGSKILALTVDAHGSVAFDAVVKQGENA
GKIVYSKHSDLVPKIATSDSQAPVDGDEEQKEIEETTERTKAALEKVVNVRLSAAQPKNV
PTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVQMRSKVQRELQLKEKERKEQELRALAQKARMERTGGPPAPSGVPTG
GSRGAVEAIDEDMDMEQPREPREQRRESREEREARIERDRIREERRRERERERRLEAKDA
AMGKKSKITRDRDRDISEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNI
YSKGLFTAQSTMSTLYRPKKDGDSDVYGDADEQLEKVMKTERFKPDKGFTGASERTGKRD
RPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASGGSSMRDDYDGGSGRSRI
NFERGR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctcaaggacctcctcccggcgccgaagacgacggcgtccaccttctacgac
cacagcagcgacccctggttcaaggagcgctacggcggggagccggcgcaggggtccgcg
gcggcgaggcccgcggccgccaccagggccatcccgccctacgggaagcgggcgggcttc
gtgccgcgccggccggaggacttcggggatggcggcgccttcccggagatccacgtcgct
cagtacccgctcggcatgggccgccgcgacgacaagggcggttccaagatcctcgcgctc
acggtcgacgcgcacggcagcgtcgctttcgacgccgtcgtcaagcagggcgagaacgcc
ggtaagatcgtctactccaagcacagcgacctcgtgccgaagatcgccacgtccgattcc
caggcgccggtcgacggcgacgaggagcagaaggagattgaggagaccacagagcgaacg
aaggctgccttggagaaggttgtcaacgtacgcctctcagctgctcagcccaagaatgtg
cccacgcatgattctgagtccaagtttatcaagtataagccgtcccagcaatccgcggcc
ttcaattcaggcgcaaaggagaggatcattaggatgtcagagatggcagtggatcctctt
gagccgccaaagttcaagcacaagcgggtgcctcgggcgtctgggtcaccacctgtgccg
gtgatgcactcgccaccacggccagttacagtgaaggatcagcaggattggaagatcccg
ccatgcatttcgaattggaaaaatccaaaggggtacacaattccacttgataagaggttg
gcagctgacggaagggggctgcaggaggtgcagattaatgataactttgcaaaactttct
gaagcattgtatgtcgcagagcagaaggcgagggaggcagtacagatgcgctccaaggtt
cagagggaactacagctgaaggagaaggagaggaaggagcaagagctgagggctcttgcc
cagaaggcacgcatggagaggactggtggcccacctgcaccatcaggtgtgcctactggt
ggcagcaggggagcggttgaggctatcgatgaagatatggatatggagcaaccacgtgaa
ccacgtgagcagcgcagggagagtagagaagagagggaagcgaggatcgagcgtgataga
atccgtgaggagcgcagacgtgagagggagcgggagaggaggctagaagccaaggatgct
gcaatgggcaagaagagtaagatcacgagagacagagatcgtgacatcagtgagaagatt
gctctgggtatggcaagcactggtggtgccaaaggtggtgaggtcatgtacgaccagcgg
ctgttcaaccaggacaaggggatggactctgggtttgccactgatgatcagtacaacatc
tactctaaggggctcttcacagcgcagtccacgatgtctacgttgtacaggcctaagaaa
gatggtgattctgatgtgtatggtgatgcggatgaacagttggagaaggttatgaagact
gagaggttcaagcctgacaagggtttcactggtgcttcagagaggactggcaagcgagac
aggcctgtggagttcgataagcaggaggagaatgatcccttcggtctggatcagttcttg
actgaggtgaagaagggaaagaaagccgtggagaagattggaggtggaggcaccatgaag
gcaagtggtgggtcctcaatgagggatgactatgatggaggatctgggaggtcccgcatt
aattttgaaagggggcgttaa
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