Setaria viridis (green foxtail): 117839001
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Entry
117839001 CDS
T07951
Name
(RefSeq) chitinase 11
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
svs04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117839001
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
117839001
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
117839001
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Motif
Other DBs
NCBI-GeneID:
117839001
NCBI-ProteinID:
XP_034575114
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Position
9:complement(54486627..54488034)
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AA seq
260 aa
AA seq
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MTTKAIAVLICFAGAALLAAAGGASGQQQGVWSIITRPMFQRMLSHRGDSGCQGAFYTYD
AFIEAASKFPGFGTTGDDQTRRRELAAFFGQTSHETTGGWATAPDGQFAWGYCRVKEQNP
TDPPYYGRGPIQLTHDYNYRQAGKALGLDLVSNPDLVSSDPVVAFKTAIWFWMTPQSPKP
SCHAVMTDVWAPSAADRAAGRLPGYGLTTNIINGGQECGRGQGTDGAKDRVGYYKRYCDM
LRVGYGDNMACKNQKPYGGG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaaggctatcgcggtgctcatctgcttcgccggcgccgcgctgctcgccgcg
gccggcggcgccagcgggcagcagcagggcgtgtggagcatcatcacgcggcccatgttc
cagcgcatgctcagccaccgcggcgacagcggctgtcagggcgccttctacacctacgac
gccttcatcgaggccgccagcaagttccccggcttcggcaccaccggtgacgaccagacc
cgccggcgggagctcgccgccttcttcggccaaacatcccacgaaaccaccggtggatgg
gctactgctccggatggacagttcgcctggggatactgccgggtgaaggaacagaacccc
acggacccaccctactatggacgaggacccatccagctaactcacgattacaactacagg
caagccgggaaggcgctggggctggacctggtgagcaaccctgacctggtgtcgagcgac
cccgtggtggcgttcaagacggccatctggttctggatgacgccgcagtctcccaagccg
tcgtgccacgccgtgatgaccgacgtctgggcgccctccgccgccgaccgcgccgcgggg
aggctccccggctacggcctgaccaccaacatcatcaacggcgggcaggagtgcgggcgg
ggccagggaaccgacggcgccaaggaccgggtcggctactacaagaggtactgcgacatg
ctccgagtgggctacggggacaacatggcctgcaagaaccagaagccttacggaggtggc
tag
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integrated database retrieval system
