Setaria viridis (green foxtail): 117839072
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Entry
117839072 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117839072
04121 Ubiquitin system [BR:
svs04121
]
117839072
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117839072
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117839072
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117839072
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
Zf_IFT144_1st
zf-HC5HC2H_2
zf-C3HC4_3
DUF6033
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117839072
NCBI-ProteinID:
XP_034575208
LinkDB
All DBs
Position
9:complement(2262323..2264825)
Genome browser
AA seq
380 aa
AA seq
DB search
MDEGQGVRYWCHMCEEVIDPMPEMKCPSCEGGFVEEMDSEGFEPATNTRSDRSLSLLAPL
LLGVLGGSSRRSRLRRAAMEDADADEDDDEDDSDRELEVPSRRRRRRGSSALARLLQTIH
DDIRGLDDTDSDTERDMERERRERQRAERRVERQRAERRAERLREIERLSDRGRERTESL
ILINSNNEAIILQGTFGRDDNQEESSNTSSGVSLGDYFLGPGLDILLQRLAESDLSRSGT
PPAKKEAVDSLPTVNIKELLGCSVCLEDFEMGAEAKQMPCQHKFHPHCILPWLELHSSCP
VCRFQLPTEETKNPCESASGAGAMNGDGDNAAASSSSDTEGTNRNGDNRSDSPIFSALSA
LFSDPSSSDDDEGAPHSSES
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggccagggagtgaggtactggtgccacatgtgcgaggaggtgatcgatcct
atgcctgagatgaagtgcccgagctgtgagggcgggtttgtggaagagatggactctgaa
ggctttgaaccagctacgaacacgaggtctgatcgctccctctctctcttggctccactg
cttcttggtgtgctggggggttcgtcgcgcagatcaagactcaggagggcggccatggag
gacgccgatgctgatgaggatgatgacgaggatgattcagaccgtgagcttgaagttccc
agtaggaggcgaaggaggaggggctcatcagcgcttgccaggctgctccaaactatccat
gatgacataaggggcttggatgacactgacagtgatacagagagagacatggagagagaa
agaagggagaggcagagggcggagaggagggtggagaggcagagggcggagaggagggcg
gagaggttaagggaaatagagagactgagcgatcgtgggagggagaggacagaaagccta
atactgatcaactccaacaatgaggctattattctccaaggaacatttggacgcgatgac
aaccaggaggaatcaagcaacacaagttctggtgtatcacttggggattactttcttggt
ccaggcttagatattctcttgcagcgtttggcagagagtgatctcagtcgttctggcaca
ccacctgccaagaaggaagcagtggattcattgccaactgtgaacatcaaggaactgttg
ggctgttcagtctgtcttgaggactttgagatgggtgcagaagcaaagcagatgccctgt
cagcacaaattccaccctcattgcatccttccatggctggagcttcatagttcttgccca
gtctgtcgatttcagttgcctaccgaggagacaaagaacccatgtgaatcagccagtggt
gctggggctatgaacggtgatggagacaatgctgctgcaagcagtagtagtgatacagag
ggtactaaccgcaatggagacaaccgctcagatagtcctatcttctctgctttgagcgca
ctcttctctgatccatcctcatcagatgatgatgaaggtgctccacactcttctgagagc
tga
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