Setaria viridis (green foxtail): 117839092
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Entry
117839092 CDS
T07951
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117839092
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117839092
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117839092
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117839092
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117839092
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117839092
Prokaryotic type
117839092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
PheRS_DBD2
tRNA-synt_2b
DUF465
Motif
Other DBs
NCBI-GeneID:
117839092
NCBI-ProteinID:
XP_034575235
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Position
1:38256645..38260994
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AA seq
498 aa
AA seq
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MAEKSPAADVEAGLLAHLNSTGEVPDSRAFASSLGVSHLELEGVIKSLSAFRIVDSTDII
KETWVLTDEAKGYAARGSPEAQLVAAIPPEGASKDALKAKLGDAFDVGMKAAARNKWIGF
EKGNKDLVLRKVENVKDELQEQLKRLENGEVVPDRVIDDLKRRKLITKEKSIWYSLKKGP
EFVVKRKTLATDVTTEHLRSGDWKDLEFKDYNYGAQGQPIAKGYVQPLMEVREAIENIFI
MMGFTEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLKAPAATSQLPEDYLEKVKQV
HQSGGYGSKGYGYDWKRDEAEKNLLRTHTTAVSTRILYKLAQEKPFAPKRYYSIDRVFRN
EAVDRTHLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEI
FSYHDGLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIRDLFG
PKVDFNLIKSNPLCRLGL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaagtcgccggcggccgacgtggaggctggcctccttgcccaccttaactcc
acgggcgaggtccccgactctcgcgccttcgcctcctccctcggcgtctcccacctcgag
ctcgagggcgtcatcaagagcctctcagctttccgcatcgtcgacagcaccgatatcatc
aaggagacttgggtgctcaccgacgaggccaagggctacgccgccaggggatcccccgag
gcgcagctcgtcgccgccatcccaccggagggcgcctccaaggacgcactcaaggcgaaa
ttgggggatgcttttgatgtgggcatgaaggctgctgcgaggaacaagtggatagggttc
gagaaggggaacaaggacttggtccttagaaaggttgagaatgtcaaggatgagttgcaa
gagcagcttaaaaggctagagaatggcgaggttgttcctgatagagtgattgatgatttg
aagagaagaaagcttattacgaaagagaaatcgatttggtactcactaaagaaagggcct
gagtttgttgtgaagagaaaaactttggcaactgatgtgacaacagaacaccttaggagt
ggtgactggaaggaccttgaattcaaagattataattatggagctcaaggacaacctatt
gccaaaggttatgtgcagcctttgatggaggttcgtgaggcaattgagaacatatttatt
atgatgggattcactgagatgccaaccaacaatttcgttgaaagcagcttctggaatttc
gatgcactgttccagccacaacagcatcctgctcgggattcacatgatacatttttcctg
aaagcccctgcagctacaagtcagctgcctgaagactatcttgagaaagtaaagcaagtt
caccaatctgggggctatggctccaaaggatatggttatgactggaaacgggatgaagca
gagaaaaatcttcttcgtactcatacaactgctgtttccacgagaattttgtacaagctt
gctcaagagaaaccttttgctccaaagagatattactccattgaccgggttttcagaaat
gaagcggttgaccggactcatcttgctgaattccaccagatagaaggccttatctgtgat
tatggtttgacgcttggtgatctgattggtgtattagaagatttcttctcaagcctaggc
atgtcaaagctgcggttcaagcctgcctacaatccatatactgaaccaagcatggaaatt
ttcagttaccatgatggtttaaagaaatgggttgaagttggtaattcaggcatgtttagg
cccgagatgttgcttcccatgggactgccagaaggtgttaatgttattgcatggggtctt
tcgcttgaaaggccaacgatgattctatatggaattgacaacattagggacctgtttgga
ccaaaggttgatttcaacctcatcaagagcaacccactatgccgtttgggactataa
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