Setaria viridis (green foxtail): 117839155
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Entry
117839155 CDS
T07951
Name
(RefSeq) metal transporter Nramp2
KO
K21398
natural resistance-associated macrophage protein 2
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117839155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117839155
Transporters [BR:
svs02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
117839155
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Gene cluster
GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
117839155
NCBI-ProteinID:
XP_034575314
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Position
9:50997548..51001525
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AA seq
522 aa
AA seq
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MASRDLNESLLPGGGGGSAAAAASASHDEYEERAYDSDDKVSISISDSDAEADDGGPPSR
PPFSWRKLWRFTGPGFLMCIAFLDPGNLEGDLQAGAAAGYQLLWLLLWATVMGALVQLLS
ARLGVATGKHLAELCREEYPPWATRALWAMTELALVGADIQEVIGSAIAIKILSGGTVPL
WGGVVITALDCFIFLFLENYGVRKLEAFFAVLIATMAVSFAVMFGETKPSGKELLIGLVV
PKLSSKTIKQAVGIVGCIIMPHNVFLHSALVQSRKIDTNKKSRVQEAVYYYNIESILALI
VSFFINICVTTVFAKGFYGTEQAGNIGLENAGQYLQEKYGTAFFPILYIWAIGLLASGQS
STITGTYAGQFVMGGFLNLRLKKWLRAMITRSFAIIPTMIVALFFDTEDPTMDILNESLN
VLQSIQIPFALIPLITLVSKEQVMGSFVVGPITKVISWIVTVFLMLINGYLIVSFYITDV
RGAVLRSSLCVVLVVYLAFIVYLIVRNTSLYSRLCSSMPKRS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgcgacctcaacgagagcctcctccccggcgggggcgggggctccgccgcc
gccgctgcctccgcctcgcacgacgagtacgaggagcgcgcctacgactccgacgacaag
gtctccatctccatctcggactccgacgccgaagccgacgacggcgggccgccgtcgcgc
ccgcccttctcctggcggaagctctggcgcttcacgggcccgggcttcctcatgtgcatc
gcgttcctcgacccgggaaacctggagggggacctgcaggcgggcgccgccgcggggtac
cagctgctgtggctgctcctgtgggcgacggtcatgggcgcgcttgtgcagctgctgtcc
gcgcggctcggggtggccacggggaagcacctcgccgagctctgccgcgaggagtacccg
ccctgggccacgcgcgcgctctgggccatgaccgagctcgcgctcgtcggcgccgacata
caggaagtgattggcagcgcgattgccatcaagatcctgtcgggaggcactgtgccgctc
tggggcggcgtcgtcatcaccgctctcgattgcttcatctttctcttcctggagaattat
ggtgtgagaaaactggaagcattttttgctgtattgattgcaaccatggctgtgtcattt
gcggtcatgtttggtgaaacgaagcctagtggaaaggaacttctcattggtttggtggtt
ccaaagttgagttcaaagaccattaagcaggccgttggaattgtgggctgcatcatcatg
cctcacaatgttttcttgcattccgccctagtgcagtccaggaagattgacacaaacaag
aaatcccgtgttcaagaagcagtgtactactacaacattgagtcaattcttgcactcatt
gtgtccttctttattaatatctgtgtcacaacggtttttgccaaaggattttatgggact
gaacaggctggtaatataggtcttgagaatgccgggcagtacttacaggaaaaatacgga
actgcattctttcccatcctctatatctgggctattggtttgttagcatctggacagagt
agcacgattactggcacatacgcaggccaatttgttatgggaggtttccttaatcttcga
ctgaagaagtggctacgagcaatgattactcgaagtttcgccattattccaactatgatt
gtggctctgttttttgatactgaagatcctacgatggatattctgaatgaatcactcaat
gttcttcagtccatacagattccatttgcactaatacctctcatcacccttgtttcaaag
gaacaagtcatgggatcattcgtagttggtcccatcaccaaagtgattagctggattgtt
acggtctttctaatgcttatcaatggatatcttatcgtttcattctacattactgatgtc
cggggtgcagtgcttcgctcaagcttgtgtgttgtgctggttgtttaccttgcattcatc
gtctatcttatcgtgcggaatacttcgctgtattctcgcctttgctcatcaatgccaaag
aggtcatga
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