Setaria viridis (green foxtail): 117839185
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Entry
117839185 CDS
T07951
Name
(RefSeq) flowering locus K homology domain
KO
K21444
poly(rC)-binding protein 3/4
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117839185
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117839185
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
RemA-like
Motif
Other DBs
NCBI-GeneID:
117839185
NCBI-ProteinID:
XP_034575352
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Position
9:complement(10766270..10771439)
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AA seq
582 aa
AA seq
DB search
MINAARRLLSGLDDTSAPLVAPESAAARAQSRLTGGNSSPGSWPPLPPTLPPSENMDGPV
ENIVGHDDGGMAVNPYDGEQPNPYDDVEKQYGEELGNQYDKQPGAQYDDGSGNLYNEEQA
NLFSEETGNQYDEEPANSYQEELENAYSVEDTSRQDNSQVNVEDNRWPGWPGESVFRILV
PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERAVMVSAKDEPDAPVSPAMDGL
LRVHKRITDSSDGESGQPQRSAGNIGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSVVR
IVENVPPVALNDDRVVEIQGEPLGVHKAVELIASHLRKFLVDRSVLPLFETHMKMHSMQR
EQPMPPPQHWGPPQPWGPPPNLPPGGPGFGGNPQFMPPRPQDNYYPPPDVPPAPVEKQPH
YGISAYGREVPPSGVSAAGNQPPSHAGSQVTTHNMHIPLAYADAVIGAAGASISYIRRHS
GATVTIQESRGAPGEMAVEIIGTASQVQTAQQLVQNFMAEAATPGPPPASNPPAPPVDPS
YGSYPPPYGAAPSYGSSAAAGPPPQYNGGSYGGPTYPPSYGY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgccgcacgacgactcctctccggtctcgacgacacgagcgctcccctcgtc
gcacccgaatccgccgccgccagagcccaatcccgcctcaccggcggcaattcctcgccg
gggtcgtggcctcccctcccacccacccttccaccatcagaaaacatggatggaccagta
gagaacattgtgggacatgatgatggcgggatggctgtaaatccttacgatggagaacag
ccaaacccatacgacgatgtggagaagcagtatggtgaagagctgggtaatcagtacgac
aaacaacctggtgcccagtatgatgatgggtctgggaacctgtacaacgaagagcaggca
aacttgttcagcgaggaaaccgggaatcagtacgatgaggagccggcaaattcttaccag
gaagagctggagaatgcatacagcgttgaggatacgagccgacaggacaactcgcaggtt
aacgttgaggataacagatggcctggttggccaggagagagtgtttttcgtatactggtt
ccagcccagaaggtaggagctatcattggccgcaaaggggagtttatcaagaagatgtgt
gaggagtctaaagcgcgcatcaaaatacttgatggcccacctggtgtaccagaaagagcg
gtaatggtttcagcaaaggatgaaccagatgcaccagtatctccagctatggatggttta
cttagagttcataaaagaataactgatagttcagatggtgaatctggtcagcctcaaaga
agtgctggtaatattggaccaacacggcttctggttccagcttcgcaagctggcagcctt
attggaaagcagggagcaactattaaatccatacaagattcttcaaagtctgttgtccgt
attgttgagaatgtgcctcctgttgcgttaaatgatgacagagttgtggagatacaaggc
gagcctcttggtgtccacaaagcagtggaattgatagcaagtcacttaagaaagtttctt
gttgatcgcagtgttctcccattatttgaaacacatatgaaaatgcacagtatgcagagg
gagcaaccaatgccacctccccagcattggggccctcctcaaccctggggtcctcctcca
aacctacctccaggtggtccgggttttggtggaaatccacagttcatgcctccaaggcca
caagacaattattatcctcctcctgatgtcccccctgcccctgtggaaaagcagccacac
tatggtatttctgcatatgggcgcgaggtcccaccaagcggtgtttctgcagcaggcaat
caaccgccctctcatgcaggatcccaggtgacgacacataacatgcacattccccttgcc
tacgctgatgctgtgattggggcagctggtgctagcataagctatatccgtaggcacagt
ggtgcaacggtaactattcaagaaagcagaggtgcacctggagagatggctgtggagata
attgggactgcatctcaagttcaaactgcccagcaactggtccagaatttcatggcagaa
gctgctaccccaggcccaccgccagcttctaaccctcctgctccgccagttgatccaagc
tacggctcctacccaccaccatacggagccgctccatcctatggttcttcggccgccgcg
ggccctcctccgcagtacaacggagggagctacggtggcccgacctaccctcctagctat
ggttattag
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