Setaria viridis (green foxtail): 117839238
Help
Entry
117839238 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC3
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117839238
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117839238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Cupin_8
Motif
Other DBs
NCBI-GeneID:
117839238
NCBI-ProteinID:
XP_034575415
LinkDB
All DBs
Position
9:34828230..34834580
Genome browser
AA seq
881 aa
AA seq
DB search
MFGDCQVLSSMAAMAGASSSADALFIPNPGALAGFMSSSAAAMPFHHFSTTTASLILPKE
EGGMMGALQAAKDEDMELEMDMELSGGSGSGHLDGLLSFADVDDDRPEQKPQHGGLDLQA
ADAGQPPQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQ
VKFWFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMS
YEEQQLRIENARLKDELDRLACIATRYGGGGRQPSMSSALVCLPGPPPVLMPPLDLDMSV
YSRHFTDQSPVMGCGDLIQSVLAPPPQQIAGGGAENHAASSSYMGSIMAPVPEQDRQLVL
DLAATAADTLAKMCRAGEPLWVRCRSGAGSEVMVADEHARMFSWPVDSGKQGGGSPVAGA
RTEGSRDSAVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQVINHGAASGHLGSGSLL
LMQAEVQFPSPLVPAREVVFFRYCVHNGDEGTWSVVDFPAEGFQLEALQTSSVVKCQRRP
SGCIIQDMPNGYSRVVWVEHMEMVGEEKPLHQVFKDYVANGTAFGATRWVSLLQRQCERL
ASELARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGSQSWTALSESTEDTIRVT
TRKNTDPGQPSGVILTAVSTSWLSFSHQQVFELLADEQQRCQLEILSNGGSLHEVAHIAN
GSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPS
YIPLLPLGFAIFPATNPSPAATSTSSGNGESSPGNPEEPASGCLLTVGMQVLASAVPSAK
LNLSSITAINSHVCNAIHQITTALKGTGTSGAELAAVGGSD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggactgccaggtcctgtcctcgatggcggccatggccggggcctcatcctcg
gcggacgcgctcttcatccccaaccctggcgcgctcgccggcttcatgtcctcctccgcc
gccgccatgccgttccaccacttctccaccaccaccgcctccctaatactacctaaggag
gagggcggcatgatgggcgcgctccaggcggccaaggacgaggacatggagctggagatg
gacatggagctcagcggcggctccggcagcggccacctggacggcctcctcagcttcgcc
gacgtggacgacgaccggcccgagcagaagccgcagcacgggggcctcgacctccaggcg
gcggacgccgggcagccgcctcagcagcagctcgccaccgccaacggcaagaagaagcgc
taccaccgccacaccgcgcaccagatccagcagatggaagcgctgttcaaggagtgcccg
cacccggacgacaagcagcggctgaagctgagccaggagctggggctgaagccccgccag
gtgaagttctggttccagaaccggcgcacgcagatgaaggcgcagcaggaccgcgccgac
aacgtgctcctccgcgccgagaacgagagcctcaagagcgacaactaccgcctccaggct
gccatccgcaacgttgtctgccccaactgcggccacgccgccgtcctcggcgagatgtcc
tacgaggagcagcagctccgcatcgagaacgccaggctcaaggacgagctcgaccgattg
gcgtgcatcgcgacccggtacggcggcggcggccgccagccaagcatgtcgtccgcgctg
gtctgcttgccggggccgccgccggtgctcatgccgccgctcgacctcgacatgagcgtc
tactcgcgccacttcacggaccagtccccggtcatgggctgcggcgacctcatccagtcc
gtcctcgcgcccccgccacagcagatcgccggcggcggcgccgagaaccatgccgcgtcg
tcctcgtacatgggctccatcatggcgcccgtccctgagcaggacaggcagctggtcctc
gaccttgctgccacggcggctgacaccctcgccaagatgtgccgcgccggcgagccgctc
tgggtgcggtgccgcagcggcgcgggctccgaggtcatggtggccgatgagcacgcgcgg
atgttcagctggccggtcgacagtgggaagcagggcggaggctccccggtcgccggcgcc
aggaccgagggttcaagggacagcgccgtggttatcatgaacagcatcacgctggtggat
gccttcctggatgcaaacaagtggatggagctgttcccttctattgtgtccaaggcaaga
actattcaggtcataaaccatggagctgcttctggccatctgggcagtggatctctcctc
ttgatgcaggcagaggtgcagttcccatctcctctggtgccggcgcgggaggtggtgttc
ttccgctactgcgtgcataatggtgatgaggggacctggtctgttgttgacttccccgca
gaggggtttcagctggaggcactacagacatcatcagtggtcaagtgccagcgtcgcccc
tctggctgcatcatccaggacatgcccaatggctactcaagggtggtgtgggtcgaacac
atggagatggttggggaggagaagccgctgcaccaggttttcaaggactatgtagccaat
ggtactgcctttggtgccacacgttgggtctccctgctccagcgccagtgtgagcgcctc
gccagtgagctcgcccgcaacattgccgaccttggagtgattcgcaccccagaggcaaga
acgaatatgatgaagctgtcgcaacggatgatcaccactttctgtgccaacatcagtgct
tctgggagccagtcttggacggcactctcggagtctacagaggacacgatcagggtcact
actcggaagaacacagatccagggcagcccagcggtgtcatcctgactgctgtctccaca
agttggctttctttcagccatcagcaggtctttgagcttcttgccgatgaacaacaacgc
tgtcagcttgagattttgtcaaacgggggctcacttcatgaagtggcacacattgcaaat
ggatcacaccctagaaattgcatctctcttcttcgaattaatgctgcaagcaactcatca
cagaatgtggagctcctgctgcaggagagcagcacccaccctgatggcgggagtcttgtg
gtgtttgcaactgtggatgtggacgccatccaagtgacgatgagcggcgaggacccttcc
tacattcctctcctacccctgggctttgccatcttcccagcaaccaacccttctcctgca
gcaaccagcacaagctccggcaatggagaaagcagcccaggtaacccagaagagcctgcc
agcggctgcctcctcaccgttggcatgcaggtgctagccagcgctgtgccctcagccaag
ctgaacctctcaagcatcacagcaatcaacagccatgtctgcaatgccatccaccagatt
acaaccgcgctaaagggcactggaaccagcggggctgagctggcagctgtggggggctcc
gactag
DBGET
integrated database retrieval system
