Setaria viridis (green foxtail): 117839246
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Entry
117839246 CDS
T07951
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3
KO
K14026
SEL1 protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117839246
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GFIT
Motif
Pfam:
Sel1
TPR_6
TPR_27
Motif
Other DBs
NCBI-GeneID:
117839246
NCBI-ProteinID:
XP_034575428
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Position
9:complement(48460885..48468908)
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AA seq
685 aa
AA seq
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MARFLLHRPLLLLAAISVAIVASLARPAAAVRPFVLVLSVDDFLKDSSAHPSLPSADSAG
ADADADEWDDFADDSPGADPLLSPSSWVPLLDPASSPPSGDEPDSPADSLFVAGARAMLS
AASEGDDAAFITAAAQIEAAATAGHPGAQSALAFLSGAGMTRPASRSRAFLLHKFAADAG
DLQSKMAIAYSYFRQEMYEEAVTLYAELAEAALTSSLISKEPPVIEPIRLHSGTEENKEA
LRKSRGEDDEDFQITEYQAQRGNAGAMYKLGLLYYYGLRGLRRDYRKAFHWFSKAVEKGD
TRAMEVLGEIYARGAGVERNYTEAYKWLALAAKQPHYSAYNGLGYLYVKGYGVEKKNLTK
AREYFKLAADNKEAGGHYNLGVLYLKGIGVKRDIIEACNHLLQAVNAGQPKAIYQVAKLF
QKGIGLKRNLHMATMLYKSVAERGPWSSLSRWALESYLKGDLGKALLLYSRMADLGYEVA
QSNAAWILDRYGDQSICMGESGFCTDMERHLRSHALWWQASEQGNEHAALLIGDAYYYGR
GVARDYERAAEAYMHAQSQSNAQAMFNLGYMHEHGHGLPLDLHLAKRYYDQAVAVDSAAK
LPVMLALTSLWLRKNYADSFLVRFIDSLPEIYPVVEEWVEDVLMDEGNATILTLFACLVT
VLYLRERQRRQVAAANPQQPDGAPM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcctcctccaccgccctctcctcctcctcgccgccatctccgtcgccatc
gtcgcatctctcgcccgcccagccgccgctgtgcgccccttcgtgctggtcctctccgtc
gacgacttcctcaaggactcctcggcgcacccctccctgccctccgccgactccgccggc
gccgacgccgacgccgacgagtgggacgacttcgccgacgactcgcccggcgcggacccg
ctcctctccccttcatcctgggttcccctcctcgaccccgccagctctcccccctcgggc
gatgagccggactcgccggccgactcgctcttcgtcgcgggcgcccgcgccatgctctcc
gcggcgtccgagggggatgacgcggctttcatcacggccgccgcgcagatcgaggccgcg
gccacggcggggcacccgggcgcccagtccgcgctcgcgttcctctctggcgccgggatg
acgcgcccggcgtcccgatcgcgcgcgttcctgctgcacaagttcgctgctgacgcggga
gatcttcagtctaagatggccatcgcgtactcctacttccgccaggagatgtatgaagaa
gctgttacactatatgctgaacttgcagaagctgccctaacaagctccttgatatcaaaa
gagccaccagtgattgaaccaatccgcctccacagtgggactgaagaaaacaaagaggcc
ttgaggaagtcccggggtgaggatgatgaggattttcaaatcacagagtaccaggcacag
cgaggcaatgctggtgccatgtacaaattagggcttttgtattactatggactccgaggg
ctccgacgtgattatagaaaagcatttcattggttttcaaaggctgttgagaaaggcgac
acacgagcaatggaggttctgggtgagatctatgctagaggtgctggagtggaaaggaac
tatactgaagcttacaagtggttggcacttgctgcaaagcagccgcattactcagcctac
aatggattgggttatctatatgtcaaaggatacggggtggagaaaaaaaacttgacaaag
gcaagggaatattttaaacttgcagctgacaataaggaagctgggggacattataacctt
ggtgtgttgtatcttaaaggtattggtgtaaagagggatattatagaagcatgcaatcat
ttgcttcaagcagttaatgctgggcaaccaaaagctatttatcaggtggcgaaattgttc
cagaaaggcattggtcttaagaggaatctccatatggcaacgatgctgtacaagtctgtt
gctgagagaggaccctggagttcactatctagatgggctctggaatcttatttgaaaggc
gatttggggaaagcgttgctcctatattccagaatggcagatcttggatacgaggttgca
cagagtaatgctgcctggattctggataggtatggtgatcaaagtatttgcatgggagaa
tctggtttctgcacagacatggaaagacatcttcgttcacatgctttgtggtggcaagca
tctgagcagggtaatgagcatgctgctttattgattggtgatgcctactactatggtcgg
ggcgtagcaagggattatgaacgtgcagcagaagcatatatgcatgctcagtcacagtct
aatgctcaggccatgtttaaccttggctacatgcatgagcatggtcacggacttcccctt
gatttgcacttggcaaaaagatattatgatcaagctgttgcggtggattcagctgctaag
ctccctgtcatgcttgctcttacaagtttatggctaaggaagaactatgctgacagtttt
ttggttcgttttattgattcactgccggagatatatcccgtcgttgaggaatgggtggag
gatgttctcatggatgaagggaatgcaacaatattgactctcttcgcttgccttgtaact
gtcctgtacttgcgagagcgtcaacggcgtcaggtggctgcggccaacccccaacaacct
gatggtgcacctatgtaa
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