Setaria viridis (green foxtail): 117839269
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Entry
117839269 CDS
T07951
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117839269
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117839269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
U-box
HVO_0758
Motif
Other DBs
NCBI-GeneID:
117839269
NCBI-ProteinID:
XP_034575460
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All DBs
Position
9:2124911..2131578
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AA seq
668 aa
AA seq
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MGHQLSCDLRPAQCGELKREGRSPANPTADSSRRAMASPPGANSAASSSRGAPLPLPFPF
AAAAHFPSRAAVPFMPQHHHLPPTSDGDEEVEEDEESMDDGSGEEDEAELEDGAALGPQQ
RRASSAPGIGRAAMNGENGVRHIQEGHQWQQQSHLYNRGTEQYGSTSSGGDEPGTIPREM
RVENGYGVIGRREGGPASSYWDLLRAHLSDPLTGVLMDDAMILSCGHSYGSGGMHHIYRM
KACGKCGQPISEDTIRPNLALRLAVQAFKREEDSAKTLKRRRERLEQGFDLASPGCAAAA
MERELLETFEAAKKAADAAAGADDSPEADRCLDALRRLRAIRVNTDVLVSTQVGKRLRHL
TKHPHSGIQAVATDLFGYWKKVVLEETGKKNGSSENERSSDSSGKVEKARPIKIERNSSS
SSMKVEKRDVDVKGQKPDSVKVEKTASNGSKAHPVKVERVSKEVGRTPDTKKPASVPTGP
PKLTSLVKCNDATRDKIRELLAEAFAKVSGETRNDDREEVRNILDEVDACDPFRVAVTVE
SALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLIGQVRPERLPDVSPEEMASDAR
KQENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVN
CNNHWKFC
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcagctcagctgtgacctgcgaccagcgcagtgcggagagctgaagcgtgaa
ggccggagcccagcaaaccccaccgccgactccagccgccgcgccatggcttctcctccg
ggggccaacagcgcggcctcctcctcgaggggggcgcccttgccgttgccctttcccttc
gccgccgcggcccacttcccctcccgcgccgccgtccctttcatgccgcagcaccatcac
ctgccgcccacctccgacggcgacgaagaggtcgaagaagatgaggaaagtatggacgac
ggcagcggcgaagaggatgaggccgagctggaggacggagccgccctcggcccgcagcag
cgacgcgcctcctccgccccaggtattgggcgggcagcgatgaatggggagaatggagtg
aggcatatccaagaggggcatcagtggcagcagcagagtcatttgtataaccgtggaacc
gagcaatatgggtctacttcgtctggaggggacgaacctggtactatccccagggagatg
agggtggagaatggatatggagttatcggaagaagagaggggggtcctgcatctagctat
tgggacctgctgagagcacacctctctgatccgttgacaggtgttctcatggatgatgcc
atgattctatcatgtggccattcgtatggaagtggtgggatgcatcatatctacagaatg
aaagcttgtggtaaatgtgggcagccaattagcgaggacacaattcgaccaaacttggct
cttcgccttgcagttcaggcatttaaacgcgaagaagattcagcaaagacactgaaaaga
agaagagagcgccttgaacagggttttgatctcgcctcgccgggctgcgccgccgccgcc
atggagagggagctgctggagactttcgaggcggccaagaaggcggccgacgcggcggcc
ggggctgacgactcgccggaagccgaccgctgcctcgacgcgctgcggcggctgcgcgcc
atccgcgtcaacaccgacgtcctcgtctccacgcaggttggcaaacgtcttcggcacctt
accaagcaccctcactcgggcattcaggcagttgctacagacctttttgggtactggaaa
aaggtcgttcttgaagagacaggaaagaaaaatggaagctcagagaatgaaagatcaagt
gattcttcaggaaaggttgagaaggcgaggcccataaagattgaaaggaattcttcttca
tcaagcatgaaggttgagaaaagagatgtggatgttaagggtcagaagcctgacagtgtc
aaagttgagaagaccgctagtaatggttccaaagctcatcctgtgaaggttgagagggtt
tccaaagaagtcggtagaactcctgatacaaagaagccagcatctgtccccactggaccc
ccaaaacttacatcccttgtcaaatgcaatgacgctacccgagacaaaatccgggaatta
cttgctgaagccttcgcaaaggtttctggagagactagaaatgatgaccgggaggaagtg
aggaacatcttggatgaagtagatgcatgtgacccattcagagttgctgtaacagtggag
tccgcattatttgagaggcttggacgttccactggggctcacaaggcaaaatatcggtca
ataatgttcaacctgagggcagataacaacactgatttccggagaagagttctcattggt
caagtgaggcctgagaggcttccggacgtatcccccgaagagatggccagtgatgcaagg
aagcaagagaataagcagatcaaggaaaaggctctgtttgactgtgagcgtggaggagca
ccgaaggcaacgactgaccagttcaaatgtggcaggtgtggccagcggaagacgacttac
tatcaactccagactcggagtgctgatgaaccgatgacaacatttgtgacatgtgtgaac
tgcaacaatcactggaagttctgctga
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