Setaria viridis (green foxtail): 117839280
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Entry
117839280 CDS
T07951
Name
(RefSeq) alpha-amylase type B isozyme-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117839280
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
117839280
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GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
117839280
NCBI-ProteinID:
XP_072151557
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Position
1:complement(38385285..38391808)
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AA seq
427 aa
AA seq
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MASKGMLLALFIALLGLSSNSAAGQVLFQGFNWESWKQNGGWYNFLMGKVDDIAEAGITH
VWLPPASHSLAEQGYLPGRLYDLDASRYGNEAQLKSLIEAFHDKGVKVIADIVINHRTAE
HQDGRGIYCMFEGGTPDSRLDWGPHMICSDDRAYSDGTGNPDTGADFGGAPDIDHLNPRV
QRELIGWLNWLKTDIGFDAWRLDFAKGYSADVAKVYIDNTEPCFAVAEIWTSLAYGGDGK
PYYDQNAHRQELVNWVDRVGRSGPATTFDFTTKGILNVAVDGELWRLRGADGKAPGLIGW
WPAKAVTFIDNHDTGSTQHMWPFPADKVMQGYAYILTHPGSPMIFYDHFFDWGLKNEIAH
LVSIRDRHGIQPDSELHIIEADADLYLAEIDGKVIVKIGSRFDCEHLIPEGFHVTAHGDG
YAVWEKI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaagggcatgttactggctctgttcatcgcccttcttggcctgtcgtccaac
tcggcggctgggcaggtcctgtttcagggcttcaactgggagtcgtggaagcagaacgga
ggatggtacaacttcctgatgggcaaggtggatgacatcgccgaggccggcatcacccac
gtctggcttcctccggcgtcgcactctctcgccgagcaaggctacctgccggggcgccta
tacgatctcgacgcgtccaggtacggcaacgaggcgcagctcaagtccctgatcgaggcg
ttccacgacaagggcgtcaaggtgatcgccgacatcgtcatcaaccaccgcacggcggag
caccaggacggccgcggcatctactgcatgttcgagggcggcacgcccgactcccgcctc
gactggggcccccacatgatctgcagcgacgacagggcctactccgacggcacgggcaac
cccgacaccggcgccgacttcggcggcgcgccggacatcgaccacctcaacccgcgcgtc
cagcgggagctcatcggctggctcaactggcttaagacggacatcggcttcgatgcgtgg
cgcctcgacttcgccaagggctactccgccgacgtcgccaaggtctacatcgacaacacc
gagccctgcttcgccgtcgctgagatatggacctcgctggcctacggcggcgacggcaag
ccgtactacgaccagaacgcgcaccggcaggagctcgtgaactgggtcgaccgcgtcggc
aggtccggccccgccaccacgttcgacttcaccaccaagggcatcctcaacgtcgccgtc
gacggcgagctgtggcggctccgcggcgccgacggcaaggcgcccggcttgatcgggtgg
tggccggccaaggccgtgaccttcatcgacaaccacgacaccggctccacgcagcacatg
tggcctttccccgccgacaaggtcatgcagggctacgcctacatcctcacgcaccccggc
agcccaatgatcttctatgatcatttcttcgactggggcctcaagaacgagatcgcgcac
ctggtgtccatcagggatcgccatggcatccagccggacagcgagctgcacatcatcgag
gctgacgccgacctctacctcgctgagatcgacggcaaggtcatcgtgaagatcgggtcc
agattcgactgcgagcacctgatccccgaagggttccatgtcacggcgcacggcgatggc
tacgcggtgtgggagaagatctga
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