Setaria viridis (green foxtail): 117839378
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Entry
117839378 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X2
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117839378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117839378
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117839378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
117839378
NCBI-ProteinID:
XP_034575587
LinkDB
All DBs
Position
9:complement(2942898..2951189)
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AA seq
814 aa
AA seq
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MAAASAAARMLPDGGADDEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSEL
RTSRLSPHKYYELYMRAFDEMRKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLC
TVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDA
ESINDAVEFVLQNFIEMNKLWVRMQHQLNPDNDLSGLQGPVREKEKRGKERNELRDLVGK
NLHVLSQIEGVDLDMYKETVLPRILEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETL
LSAFPQLQPSVDIKTVLSQLMDRLSNYAALSPEVLPEFLQVEAFVKFSNAIGKVIEAQPD
MPVVGAVTLYVSLLTFTLRVHPDRLDYVDQVLGACVKKLSGKAKLEDSRATKQIVALLSA
PLEKYSNIVTALELSNYPRVMDYLDISTTKVMAVVIIQSIMKNTTCISTSDKIEALFDLI
KGLIKDMDGAQDDELDEEDFKEEQNSVARLIHMLHNDDHEEMLKILCTVQKHILLGGPKR
LTFTVPSLVFSALKLVRRLQGQDGDVTGEDVPATPKKIFQILHQTIEALSCVPSPELALR
LYLQCAEAANDCDLEPVAYEFFTQAFILYEEEIADSKAQITAIHLIIGTLQRMNIFGVEN
RDTLTHKTTGYSAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAA
QQMASATRGSSGSVTLFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQSESTIADP
STEAFFSSTLRYIEFQKQKGGSIGEKYEQIKTSS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcatcggcggcggcgaggatgctccccgacggcggcgccgacgacgaggag
cggtggctcgccgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgct
ctcgactcgaacaacctcaaggacgcgctcaagtactcggcacagatgctctccgagctg
cgcacctcgcggctctcgccgcacaagtactacgagctctacatgagggcgtttgatgag
atgcggaaactggagatgttcttcagggaggagacccggcggggcagctgctccgtcgtt
gatctgtatgagcttgttcagcatgctggcaacgtcttaccgagactttatctcctgtgc
acagtggggtctgtgtacattaagtcgaaagaggctcctgctaaagatgttcttaaagac
cttgttgaaatgtgtcgaggcattcaacatcctcttcgtggccttttcctgagaagctac
ctttctcagataagcagagacaaattgccggatattggttccgagtacgaaggggatgct
gaaagcattaatgatgcagttgaatttgttcttcagaatttcatagaaatgaacaaactc
tgggtccggatgcagcatcagctgaatccagataatgatttgtctggtctgcaggggcct
gtccgggaaaaggaaaagcgggggaaggaaagaaatgaattgcgtgatctggtaggcaaa
aaccttcatgttctaagccagattgagggtgttgaccttgatatgtacaaagaaactgtt
cttccaaggatattagaacaggtggttaattgtaaggatgaccttgcacagttctacctg
atggactgcataatccaagtctttccagacgaatatcatttacagacattggaaacatta
ttgagtgcatttccccagctacagccaagtgttgatatcaaaacagtactctcccaactt
atggacagactgtctaactatgctgccttgagtcctgaagtattgccagaattcttgcaa
gttgaagctttcgtgaagttcagtaacgctattggaaaggtgatagaagcccaacctgac
atgccggttgttggagcagtaacattatatgtatcgcttctgacatttactctccgtgta
catcctgatcggcttgattatgttgaccaagtgctgggtgcgtgtgtcaagaagctttca
ggcaaggcaaaacttgaagatagcagggcaacaaagcaaattgttgcacttcttagtgct
cccctggaaaaatatagcaatattgttactgcattagaactttcaaactatcctcgggtt
atggattatctggatatttctacaaccaaagtgatggctgtggtaataattcaaagcata
atgaagaacacaacttgcatatcgacttctgacaagattgaagcactattcgatttaatt
aaggggcttataaaagatatggatggggctcaagatgatgagcttgacgaagaggacttt
aaggaggaacaaaattccgtagcacgccttattcacatgttgcataatgatgatcatgag
gagatgctgaagatcttatgtactgttcagaagcatatacttctgggaggacccaagcgg
ctaactttcactgtgccttcattagtattctcagctcttaagttggtcaggcgattacaa
ggtcaagatggagatgtaactggggaggatgttcctgcaactccaaaaaaaatattccag
atcttgcatcagactattgaagcgctttcatgtgttccttctccagagttagctctgaga
ctatatttgcaatgtgcagaggccgccaatgactgtgatttggagccagttgcttatgag
ttctttactcaagcattcatcttatatgaagaagaaattgcggattcaaaggctcaaatc
actgcaattcacctaataattggaacccttcagcggatgaatatattcggggtggaaaac
agagacaccctcactcataagacaacagggtactcagcaaaacttctcaagaaacctgat
caatgccgagcagtctatgcgtgttcacatcttttctggactgatgaccaagatggaata
atggatggtgaaagggttctcctttgtttaaagcgtgccttgagaatcgcaaatgctgct
caacagatggctagtgcgacaaggggaagcagtggatccgttactctatttattgaaatt
ttgaacaagtacttgtacttctttgagaaaggaattccccagatcacgaacactgtgatt
caagatttgattgaactgattaggactgagaagcaaagtgaaagcactatagccgatcca
tctacagaggccttcttttctagcactttgcggtacattgaatttcagaagcagaaaggc
ggaagcataggtgaaaaatatgaacaaataaagacaagttcatga
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