Setaria viridis (green foxtail): 117839389
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Entry
117839389 CDS
T07951
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117839389
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117839389
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117839389
Prokaryotic type
117839389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117839389
NCBI-ProteinID:
XP_034575600
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All DBs
Position
9:complement(29411717..29416504)
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AA seq
499 aa
AA seq
DB search
MPPATAPASPAPVHPSRVRVLQPGGGRTTGPVVYWMLRDQRLADNWALLHAAGLAAASVP
AAPIAIAFALFPRPFLLGARRRQLGFLLRGLQRLAADARARGLPFFLLEGGPAEVPALVR
RLGASALVADFSPLRQVREALDAVASELQRDAADMAVHQVDAHNVVPVWAASGKLEYSAK
TFRGKVSKVMDEYLVEYPELPALMPWDGEQSEDIYWDALIDRVCSEAENVPEIDWCEPGE
AAALEVLLGSKDGFLTKRIKNYDMGRNDPTKPHALSCLSPYLHFGHISAQRCALEARKRR
QLSPKSVDAFLEELIIRRELADNFCYYQPHYDSLAGAWEWARKTLMDHASDKREHIYTRE
QLENAKTSDPLWNASQLEMVHHGKMHGFMRMYWAKKILEWTSGPEEALSVAIYLNDKYHI
DGRDPNGYVGCMWSICGLHDQGWKERPVFGKIRYMNYAGCKRKFNVDAYISYVKRLVAQA
KKRKAEESPDTGKVKASRV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccaccgcgccggcgagccccgccccggtacatccatcccgcgtgcgtgtc
ctccaaccgggagggggccgtacgacggggccagtggtgtactggatgctgcgggaccag
cgtcttgcggacaactgggccctcctccacgccgccggcctcgccgctgcgtccgtcccc
gcggctcccatcgccatcgccttcgctctgttcccgcgtcccttcctcctcggcgcgcgc
cgccgccagctggggttcctcctccgcggcctccagcgcctcgccgccgacgcgcgcgcc
cgaggcctcccgttctttctcctcgagggcgggcctgcggaggtgccggcgttggttcgg
cggctcggagcatccgcgctcgttgccgacttctcgccgctgcggcaggtgcgggaggca
ctggacgccgtcgccagcgagctgcagcgcgacgccgccgacatggccgtgcaccaggtg
gacgcacacaacgtggtgcccgtctgggcggcgtcggggaagctggagtactcggccaaa
accttcagaggcaaggtgagcaaggtgatggacgagtacctggtggagtaccccgagttg
ccggcgttgatgccatgggatggtgagcagtcggaggatatttactgggatgcgctgatc
gacagggtttgcagtgaggcggagaatgtgccagagattgattggtgtgagccgggggag
gcagcagcgctggaggtgcttctggggagtaaggacgggttcttgacaaagaggatcaag
aactatgacatgggccggaatgatcctacaaagccacatgcattgtcgtgtctttcgcca
tacttgcattttgggcacatttcagcacagcggtgtgctctggaggcaagaaaacgccgc
caacttagtccaaagtcagtggatgcattcttggaggaactgattataaggagggaacta
gctgacaacttctgctattaccagcctcactatgattcactggctggtgcatgggagtgg
gctagaaaaacattgatggatcacgcctctgataaaagagagcatatctatacgagggag
cagctcgagaatgcaaaaacatctgatcctctgtggaatgcatcgcagttggagatggtg
caccatggaaaaatgcatggattcatgcgaatgtattgggccaaaaagattctagaatgg
accagtggacctgaagaagcactttcagtagcaatatatttgaatgacaagtatcatata
gatggcagggaccccaatggctatgttggttgcatgtggtctatatgtggcctccacgat
cagggttggaaggagcgtccagtatttggaaagatacgttacatgaattatgctggttgc
aagagaaaattcaacgttgatgcttacatttcatatgttaaaagattggttgctcaggcc
aagaagaggaaggccgaggaatctccagatacagggaaggtcaaagcgtccagagtctga
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