Setaria viridis (green foxtail): 117839455
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Entry
117839455 CDS
T07951
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
svs04145
Phagosome
svs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117839455
04145 Phagosome
117839455
04148 Efferocytosis
117839455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117839455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117839455
04031 GTP-binding proteins [BR:
svs04031
]
117839455
Membrane trafficking [BR:
svs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117839455
Endosome - Lysosome transport
117839455
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117839455
Exosomal proteins of other body fluids (saliva and urine)
117839455
Exosomal proteins of colorectal cancer cells
117839455
Exosomal proteins of bladder cancer cells
117839455
GTP-binding proteins [BR:
svs04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117839455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
ATPase
MMR_HSR1
AAA_7
MMR_HSR1_Xtn
TniB
AAA_16
Motif
Other DBs
NCBI-GeneID:
117839455
NCBI-ProteinID:
XP_034575683
LinkDB
All DBs
Position
9:53609294..53612765
Genome browser
AA seq
200 aa
AA seq
DB search
MGCSSSVPARSTGGLNTVNNDSSSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPES
FSKAQYWVKELQKHGSPGIVMVLVGNKADLHENRSVSSQDAQEYAEKNNMFFIETSAKTA
DNINQLFEEIAKRLPRPTAS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcctcgtctgtaccagctagaagtacaggagggctaaacactgtcaacaac
gatagctcttctgccactgattcaaaggacttgcgtgctaagttggtattgctgggagac
tcaggtgttgggaaaagctgcattgttcttcgctttgtgcgtggtcagttcgatcctact
tccaaggtaactgttggtgcatcctttttatcacaaacattggcattagaagactcaacg
atagtgaaatttgaaatttgggacactgctgggcaagagaggtatgctgccttggcacca
ctttactacagaggagctgctgccgcaattgttgtctacgatataactagtccagaatca
tttagcaaagcacagtactgggttaaggaacttcagaagcatggtagtcctggtattgta
atggtgttggttgggaataaggctgacctacatgagaatcgaagtgtatcttcgcaggat
gcacaggagtatgcggagaagaacaatatgtttttcatcgagacatcagcaaaaacagca
gataatataaaccaactgtttgaggaaattgcaaagaggttgcctaggccgacagcgtcc
tga
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integrated database retrieval system