Setaria viridis (green foxtail): 117839476
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Entry
117839476 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K13341
peroxin-7
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117839476
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
117839476
NCBI-ProteinID:
XP_034575709
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Position
1:complement(1787123..1788395)
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AA seq
321 aa
AA seq
DB search
MPAFKAPAPGFSVRFSPFHENRLLVAASQHFGLVGNGHLIVLDLAAAGPGPGAAPAPVFS
FPTSDALFDCAWSESHESLCAAASGDGSVRLFDAALPPAQNPVRLLREHAREVHGLDWNP
VRRDAFISASWDDTLKLWSPDRQASVRTFRGHEYCVYAAAWSARHPDVFASASGDRTARV
WDVRDPAPTLILPAHDHEVLSLDWDKYDPSILATASVDKSIRVWDVRAPRAPITQLAGHG
YAVKRVRFSPHRQGMLMSCSYDMTVCMWDYRAEDALLARYNHHTEFVAGIDMSVLVDGLL
ASTGWDEMVYIWPFGTDPRAM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgttcaaggccccggcgccgggcttctccgtccgcttcagcccgttccacgag
aaccgcctcctcgtcgcggcgtcgcagcactttggcctcgtcggcaacggccacctcatc
gtcctcgacctcgccgccgccggcccgggtcccggcgccgccccggcccccgtcttctcc
ttcccgacctccgacgcgctcttcgactgcgcctggtccgagtcccacgagtccctctgc
gccgccgcgtccggggacggctccgtgcgcctcttcgacgccgcgctcccgccggcgcag
aaccccgtgcgcctcctccgggagcacgcgcgcgaggtccacggcctcgactggaacccc
gtccgccgggacgccttcatctccgcgtcctgggacgacacgctcaagctctggtccccc
gaccgccaggcctccgtccgcaccttccgcggccacgagtactgcgtctacgccgccgcc
tggtccgcgcgccacccggacgtcttcgcctccgcctccggcgaccgcaccgcgcgggtc
tgggacgttcgcgatccggcgcccacgctcatcctgcccgcgcacgaccacgaggtgctc
tcgctcgactgggacaagtacgacccgtccatcctcgccaccgcctccgtcgacaaatcc
atccgcgtctgggacgtgcgcgcgccgcgggcgcccatcacgcagctcgccggacacggc
tacgctgtcaagcgcgtccgcttctcgccgcaccgccagggcatgctcatgtcctgctcc
tacgacatgaccgtctgcatgtgggactaccgcgccgaggacgcgctgctcgccaggtac
aaccaccacaccgagttcgtcgccggaatcgacatgagcgtccttgtcgacgggctgctt
gccagcaccggctgggacgagatggtctacatctggccgttcgggaccgatcccagagcc
atgtag
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