Setaria viridis (green foxtail): 117839518
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Entry
117839518 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117839518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117839518
Membrane trafficking [BR:
svs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117839518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
117839518
NCBI-ProteinID:
XP_034575752
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Position
9:complement(31816258..31825199)
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AA seq
567 aa
AA seq
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MVLIPLVRDYIDRMLHDIPGMKVLVLDPQTVGMVSVVYSQSDLLRKEVFLVETMDNASSS
RESMAHLKAVYFLRPSADNVQKLRRHLAMPRFAEYHLFFSNILKIPQIQILADSDEQEVV
QQVQEFYADFCAIDPYHFTLNIQNNHMYMLPTVVDPPGMQSFCDRAVDGIASVFLALKRR
PVIRYQRTSDVAKRIAQETARLMYEQESGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIENNKVDLRGFANVPKDQQEVVLSSVQDDFFRANMFENFGDLGMNIKRMV
DDFQHLSKSSLNLQSIGDMAKFVSNYPEYRKTHGNVTKHVALVSEMSRIVEERKLMLVSQ
TEQELACTSGQAAAFEAVTSLLNSESVSDIDRLRLVMLYALRYEKESSVQLMQLFNKLAS
CSAKYKSGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MEGIVKGRLRDVDYPLVGNQFQQGRPQDVVIFIVGGTTYEEARSVALYNAANPGVRFFLG
GSVVLNSKRFLEDLGEAQRISKSSTII
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatccctctcgtccgcgactacatcgaccgcatgctccacgacatcccggga
atgaaggtcctcgtcctcgacccccaaaccgtcgggatggtgagcgtggtgtacagccag
tcggatctgctgcggaaggaggtgttcctcgtggagacgatggacaatgcctccagctcc
agggagtccatggcgcacctcaaggccgtctacttcctccgaccctctgctgacaacgtc
cagaagctccgcaggcacctcgccatgccgcgcttcgccgagtaccacctcttcttctcc
aatatattgaagattccgcagattcagatactagctgattctgatgagcaggaggttgtt
cagcaagttcaggagttctatgctgatttttgtgcgattgacccataccatttcactctc
aacatacaaaataaccacatgtacatgcttccaacagtggtcgaccctccaggcatgcag
agtttttgtgatcgagctgttgatggcattgcttctgtcttcttggctctcaagcgccgc
cctgtcattagatatcagaggacatcagatgttgcaaaaaggatcgcacaagaaactgcg
agattgatgtatgagcaggagagtggcctgtttgattttagacgaacagaaaactcttcg
ttgttgttggtgattgacaggagggatgatcctgttacgcctctacttaaccaatggaca
taccaggcaatggttcatgagcttattggaatcgagaacaacaaagtggatcttagggga
tttgccaatgtacctaaagaccagcaggaggtcgttctatcatcggttcaagatgatttt
tttagagctaacatgtttgagaactttggggaccttggtatgaacatcaaaagaatggta
gatgactttcagcatctttcgaagagcagccttaatcttcagagtataggtgacatggca
aaatttgtgagcaactatcctgaatatcgaaagacacatggaaatgtaacaaaacatgtc
gccttggtgagcgagatgagcagaatcgtggaggaaaggaagcttatgctagtttcacag
acagagcaagagctagcatgtacgagtggacaagcagcagcctttgaggctgtcacttcc
ttgctaaacagtgaaagtgtatctgatattgaccgcttacgactagtaatgctctatgct
ttgcggtatgaaaaagagagttctgttcagctgatgcagcttttcaacaaactggcttct
tgttctgccaaatacaagtctgggcttgttcaattcctccttaagcaggcaggtgttgat
aagagaacaggtgacttgtatgggaaccgcgatctattaaatattgctcgcaacatggct
cgtgggcttaagggagttgaaaatgtctacacccaacaccagcctcttctcttccaaacg
atggaaggaattgtgaaagggcgattgcgagatgtggactatccacttgttggcaaccag
ttccagcagggcaggcctcaagatgtggtcatattcattgttggaggtacaacttatgag
gaagcaagatcagtagccctttataatgcagcaaatcctggagttcgtttcttccttgga
ggttcggtggttctgaattcaaagagatttcttgaagatctgggggaggcgcaaaggata
tcaaaatcgagcactataatatga
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