Setaria viridis (green foxtail): 117839554
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Entry
117839554 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117839554
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117839554
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117839554
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
117839554
NCBI-ProteinID:
XP_034575807
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Position
9:48986045..48988244
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AA seq
544 aa
AA seq
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MESAPAAVMERERLTAEMAFRGPDEGRGDGGGEPAPSIVIKIRRRLPDFARNIKLKYVKL
GIRHGGSPTSVLPMLCVPALAAAAYSFVRLDVIYYSIDLLTCVAWLGTALLLLTVYYFKR
PRPVYLVEFACYKPEDQHKISKAGFLEMTESTGCFNEAALDFQTKITNRSALGDETYLPP
GVQARPPRLNMAEARMEAEAVMFGCLDALFKSTGIDPRRDVRILIVNCSLFNPTPSLASM
IINHYKMREDVKSFNLGGMGCSAGLIAIDLAKDMLQANPNSYAVVLSTENITLNWYFGND
RSMLLSNCIFRMGGAAALLSNKRTDASRAKYRLLHTVRTHKGATNECFNCVYQREDEVGK
VGVSLARELMAVAGDALKTNITTLGPLVLPLSEQLKFLKSLMMRRVFRVKGVRPYIPDFR
RAFEHFCVHAGGRAVLEEVQRSLSLRDTDMEPSKCALHRFGNTSSSSLWYELAYAEAKGR
VRRGHRVWQIGFGSGFKCNSAVWRALRDVPALPSPGGAAAGTDRKSCCNPWAEDVDKYPP
KAYV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcgccagcggcggtcatggagcgggagcgcctcacggccgagatggccttc
cgcggccccgacgagggccggggcgacggcggcggcgagccggctcccagcatcgtcatc
aagatccgccgccggctcccggacttcgcgcggaacatcaagctcaagtacgtcaagctc
gggatccgccacggcggcagccccacgtcggtgctgccgatgctctgcgtgccggcgctc
gccgccgccgcctactcgttcgtgcgcctcgacgtcatctactactccattgacctgctc
acctgcgtcgcctggctcggtaccgcgctgctgctcctcaccgtctactacttcaagcgg
ccccgtccggtgtacctcgtcgagttcgcgtgctacaagcccgaggaccagcacaagatc
tccaaggcgggcttcctcgagatgacggagagcaccgggtgcttcaatgaggccgccctg
gacttccagaccaagatcaccaaccgctccgcgctcggcgacgagacctacctgcccccc
ggcgtccaggcgcggccgccgaggctcaacatggcggaggcgcggatggaggccgaggcg
gtcatgttcgggtgcctggacgcgctcttcaagtccacggggatcgacccgcgccgcgac
gtgcgcatcctcatcgtcaactgcagcctcttcaacccgacgccgtcgctggcgtccatg
atcatcaaccactacaagatgagggaggacgtcaagtcgttcaacctcggcggcatgggc
tgcagcgccggcctgatcgccatcgacctcgccaaggacatgctccaggcgaaccccaac
tcgtacgccgtcgtcctcagcaccgagaacatcaccctcaactggtacttcggcaacgac
cgctccatgctcctctccaactgcatcttccgcatgggcggcgcggcggcgctgctgtcc
aacaagcgcaccgacgccagccgcgccaagtaccggctgctccacacggtgcgcacccac
aagggcgccaccaacgagtgcttcaactgcgtgtaccagcgcgaggacgaggtgggcaag
gtcggcgtctccctggcgcgggagctcatggcggtggccggcgacgcgctcaagaccaac
atcaccacgctggggcccctggtcctgcccctctccgagcagctcaagttcctcaagtcc
ctcatgatgcgccgcgtgttccgcgtcaagggcgtgcgcccctacatccccgacttccgc
cgcgcgttcgagcacttctgcgtgcacgccggcggccgcgccgtgctggaggaggtgcag
cgcagcctgagcctgcgggacacggacatggagcccagcaagtgcgccctccaccgcttc
ggcaacaccagcagcagctctctatggtacgagctcgcgtacgcggaggccaagggccgg
gtgcgccgcggccaccgcgtgtggcagatcggcttcgggtccgggttcaagtgcaacagc
gccgtgtggcgcgcgctccgggacgtgccggcgctgccgtcccccggtggcgccgccgcg
gggacggacaggaagagctgctgcaacccatgggcggaggacgtggacaagtaccctccc
aaggcgtacgtctga
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