KEGG   Setaria viridis (green foxtail): 117839728
Entry
117839728         CDS       T07951                                 
Name
(RefSeq) TATA-box-binding protein 2 isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117839728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:svs03000]
    117839728
   03021 Transcription machinery [BR:svs03021]
    117839728
Transcription factors [BR:svs03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    117839728
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117839728
  RNA polymerase III system
    TFIIIB
     117839728
  RNA polymerase I system
    SL1/TIF-1B
     117839728
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 117839728
NCBI-ProteinID: XP_034576026
LinkDB
Position
9:complement(9562987..9567234)
AA seq 200 aa
MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKVQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggagccggggctcgagggcagccagccggtggatctgtccaagcacccctccggc
atcgtccccacgctccagaatatcgtatcaacagttaatttggattgcaagcttgacctc
aaagcaatagctttgcaagcacgcaatgctgagtataacccaaagcgttttgctgcagtc
atcatgagaataagagaacccaaaaccacagcactgatatttgcatcgggtaaaatggtc
tgtactggagcaaagagcgaacaacaatctaagcttgcagcaagaaagtatgctcgtatt
attcagaaacttggctttccagctaagtttaaggacttcaagattcagaatatcgttggc
tcctgtgacgtcaagtttccaattaggcttgagggacttgcatattcgcacggtgccttc
tcaagttatgaaccggaactgtttcctggcctgatctatcggatgaaacaaccaaagatc
gttcttttgatttttgtttctggcaagattgttttgactggcgctaaggtgagagaggag
acgtacactgccttcgaaaacatctatcctgtgttgacagagttcagaaaagtccagcaa
tga

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