Setaria viridis (green foxtail): 117840075
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Entry
117840075 CDS
T07951
Name
(RefSeq) uncharacterized protein C57A7.06 isoform X1
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117840075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117840075
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117840075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
117840075
NCBI-ProteinID:
XP_034576418
LinkDB
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Position
9:complement(44429227..44433995)
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AA seq
848 aa
AA seq
DB search
MPKKPAMRRGKPALGPEKKRRHGPRLPTAMRRELDAMGPGGSDDEELSDAGAQDVYEYEE
GVPEEEAGKNGRYDAVAKYEYEFDSDASEADEDVPSEEGEDMEEDDDGEDEEKQIRILQE
TTGMPREAFDGKKRKQPSELPLQHGDGPVTIHDLLDNIQGKPGYSKVRKRLQQQEKKTMI
VAAPLPKVDREKLERGVANQELKRELTKWERNVKGNREAPTLFFENDANLGVNTVAAIAS
KFKPRSEFEKRMAEITRSSEIMEAHKNDGAKILELNKIDVEDVRERQNRLAKMRSLLFRH
EMKAKRVKKIKSRTYHRMLKKDKLKVASAEFEADPEAIKDYAMKQEFKRAEERMTLKHKN
TSKWAKRILKRGLSVQDEGTRAAITAQLQQNALLTRKMNSMKDDSSSEESSDDDEDENDS
EAKILNRGKEKILKVLEEDKEIPNSGVFSLPFMERAMKKQEEAAYEEARQALEDYDDSLR
KLEDDNTEQNEDSIKVTGKRTFGPAKNTHEDVNKRQKLHETESSDSEYDSDPAQHLGNNE
PTTKQDDIQLGTALLDDEQNDLYKSFDDIMKNPGPKTTFEVGMLAGDSWKKVNSSKGNGN
SNVNGVTNKSKLQAPPIVDPNPKQQGSNPDSDSEEEMVEGFLTMSDTKENYELPSQAELI
RQAFAGDDVEADFEKDKMEVLNEENPEPEKPALVPGWGQWTDIQQKKGLPSWMIKEHAIA
KRNREEALKRRKDAKLKHVIISEHVDKKVEKYLVRNLPFPYTSKDVYEQSIRMPIGPDFN
PAISVSALNRPAIVKKPGVIIKPIQYEEVDPHMKPDEPKRVIQRVTPHPNAKKASAKQSK
GATSHKRK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaacccgccatgcggcgcggcaagcccgccctcggccccgagaagaagcgc
cgccacgggccccgcctccccacggcgatgcgccgggagctcgacgcgatgggtcccggc
ggctccgacgacgaggagctctccgacgcgggtgcccaggacgtgtacgagtacgaggag
ggggtccccgaggaggaggccggcaagaacggccgctacgacgccgtcgccaagtatgag
tacgagttcgacagcgacgcctcggaggcggatgaggatgtgccttcggaggaaggtgag
gatatggaggaagatgacgatggtgaggatgaggagaagcagataagaatacttcaggaa
acgactggaatgcctagagaagcctttgatggaaagaagaggaaacagccgtcggagctg
ccattgcagcatggtgatggacctgtcacaattcatgatctcttggataatatccaggga
aagcctgggtatagcaaggtccgtaagaggctgcagcagcaggagaaaaaaacaatgatt
gtggctgccccacttccaaaagtggatagggagaagcttgagcgtggcgtggcgaatcag
gaactcaagcgtgagctcacaaagtgggagagaaatgtgaagggcaaccgtgaagctcct
acactattctttgaaaatgatgccaacttgggtgtgaacaccgttgcggcaattgcaagc
aagtttaaaccaaggagtgagtttgagaagagaatggctgagattacacgaagcagtgaa
ataatggaggcacacaagaatgacggtgccaaaatcctggaactcaacaagattgatgtg
gaagatgtgagagaacgccaaaaccgccttgctaaaatgcgcagccttctatttcgtcat
gagatgaaagcaaaacgtgtgaagaagatcaagtccaggacatatcaccgaatgttgaag
aaggacaaactgaaggtagcatcagcagaatttgaggcagatcctgaagctatcaaagat
tatgctatgaaacaagaatttaaacgtgcagaggaaaggatgacattaaagcacaagaat
acatcgaaatgggcaaaacgaatcctcaagcgtggattgtctgttcaagatgaaggcaca
cgagctgctattacagcacaactccaacaaaatgctcttctgactagaaaaatgaattcc
atgaaagatgattctagcagtgaggaaagttcagatgatgacgaagatgagaatgactca
gaagcaaaaatcttaaacagagggaaagaaaagattcttaaagttcttgaagaagataaa
gagataccaaattcaggagttttttcgttgcctttcatggagcgtgctatgaaaaaacag
gaggaagcagcttatgaggaagcacgacaagctcttgaagactacgatgattccttgagg
aaattggaggacgataacactgaacagaatgaagattcaattaaggtgacaggtaaaaga
acatttgggcctgccaaaaatacacatgaagatgtaaataagaggcaaaaactacacgaa
actgagagtagtgatagtgagtatgattctgaccctgcccaacacttgggcaacaatgaa
ccaactacaaagcaagatgacatacaacttgggactgcactgctggatgatgaacagaat
gatctttacaaaagcttcgatgatatcatgaaaaatccaggtcctaagacaacatttgaa
gttggaatgttagctggtgattcctggaaaaaggtcaacagtagcaaaggaaatggcaat
agcaatgtcaatggcgttaccaataaatccaaattacaggctccacctattgtagatcca
aatcctaagcaacagggtagcaatcctgattcagattcagaggaagagatggttgagggc
ttcttgaccatgtctgacacaaaggaaaactatgaacttccatcgcaagctgaactcata
cgccaggcttttgctggtgatgatgttgaagctgactttgagaaggacaaaatggaagtt
ttaaatgaagagaaccctgaacctgaaaaacctgctcttgttcctggctggggccagtgg
acggacatccagcagaaaaaaggacttccatcatggatgatcaaagaacatgcaattgct
aaaaggaatagagaagaagccttgaagaggaggaaggacgcaaagcttaagcacgttatt
atttctgaacatgtggataagaaggttgagaagtatttagtgaggaatttgcctttccct
tacacttcgaaggatgtctacgagcagagcatccgtatgcctattggacctgatttcaac
ccagcgatatcagtttctgctctcaatcgacctgcgattgttaagaagcctggtgttatc
attaagccgatacagtatgaggaggttgatccccatatgaagccggatgaaccgaaaagg
gtcattcagagagtaactccacacccaaatgcgaagaaagcctctgcaaaacaatcaaag
ggggcaacttcacataagagaaagtga
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